RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 G3V2T6 193 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 EI24O14681 340 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 OR7A10O76100 309 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 AGFG2O95081 481 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 PMS2P2O95744 297 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 CH25HO95992 272 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 GASTP01350 101 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 GLI4P10075 376 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 GSSP48637 474 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 CLK1P49759 484 aaKnown RBP13.7□□□□□ -0.22
LSM1-203ENST00000520755 DIO1P49895 249 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 DAPP51397 102 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 PER3P56645 1201 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 CARD18P57730 90 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 NUP107P57740 925 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 PON3Q15166 354 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 OTUD3Q5T2D3 398 aaPredicted RBP13.7□□□□□ -0.22
LSM1-203ENST00000520755 FAM69AQ5T7M9 428 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 OGFRL1Q5TC84 451 aaPredicted RBP13.7□□□□□ -0.22
LSM1-203ENST00000520755 NSUN5P2Q63ZY6 315 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 TMEM211Q6ICI0 200 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 TMPPEQ6ZT21 453 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 TMPRSS11FQ6ZWK6 438 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 ZDHHC13Q8IUH4 622 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 LRRC17Q8N6Y2 441 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 OR13C2Q8NGS9 318 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 OR6S1Q8NH40 331 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 OSTF1Q92882 214 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 SGTBQ96EQ0 304 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 CCDC120Q96HB5 630 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 DGCR6LQ9BY27 220 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 CALHM2Q9HA72 323 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 SMURF2Q9HAU4 748 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 CLCF1Q9UBD9 225 aa13.7□□□□□ -0.22
LSM1-203ENST00000520755 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
LSM1-203ENST00000520755 NCOA6Q14686 2063 aaPredicted RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 CD8B2A6NJW9 211 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 SLC22A20A6NK97 555 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 SYNGR4O95473 234 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 TGM6O95932 706 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 ADAP00813 363 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 TP53P04637 393 aaPredicted RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 ASAH2BP0C7U1 165 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 ZNF26P17031 533 aaPredicted RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 FPR3P25089 353 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 FKBP2P26885 142 aaKnown RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 P2RY4P51582 365 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 FXYD6P3P58550 94 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 OR7A5Q15622 319 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 SEM1Q6ZVN7 128 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 ADGRE4PQ86SQ3 457 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 CBR4Q8N4T8 237 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 LINC00471Q8N535 108 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 MFSD8Q8NHS3 518 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 FNDC9Q8TBE3 224 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 LIPHQ8WWY8 451 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 GTPBP3Q969Y2 492 aaKnown RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 PRRG4Q9BZD6 226 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 FKRPQ9H9S5 495 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 TIGARQ9NQ88 270 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 PAQR5Q9NXK6 330 aaPredicted RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 MCTS1Q9ULC4 181 aaKnown RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 TMEM5Q9Y2B1 443 aa13.69□□□□□ -0.22
LSM1-203ENST00000520755 UBR5O95071 2799 aaPredicted RBP13.69□□□□□ -0.22
LSM1-203ENST00000520755 DIDO1Q9BTC0 2240 aaKnown RBP13.68□□□□□ -0.22
LSM1-203ENST00000520755 EFCAB9A8MZ26 197 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 M0R082 166 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 SULT2B1O00204 365 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 ZG16O60844 167 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 RAMP1O60894 148 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 MITFO75030 526 aaPredicted RBP13.68□□□□□ -0.22
LSM1-203ENST00000520755 MT-ATP6P00846 226 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 ALPLP05186 524 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 TSPAN19P0C672 248 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 POU2F1P14859 743 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 GRPRP30550 384 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 OR2B6P58173 313 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 RPS4XP62701 263 aaKnown RBP13.68□□□□□ -0.22
LSM1-203ENST00000520755 ADORA2A-AS1P86434 159 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 SRSF1Q07955 248 aaKnown RBP eCLIP13.68□□□□□ -0.22
LSM1-203ENST00000520755 TSPAN31Q12999 210 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 DAG1Q14118 895 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 ZNF239Q16600 458 aaKnown RBP13.68□□□□□ -0.22
LSM1-203ENST00000520755 LRRC36Q1X8D7 754 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 KDM4DQ6B0I6 523 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 MTFR2Q6P444 385 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 KLHL17Q6TDP4 642 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 RRM2BQ7LG56 351 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 KIF18BQ86Y91 864 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 FAM26EQ8N5C1 309 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 C9orf106Q8NAJ2 232 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 ZNF417Q8TAU3 575 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 GNPDA2Q8TDQ7 276 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 RND1Q92730 232 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 CPNE4Q96A23 557 aaPredicted RBP13.68□□□□□ -0.22
LSM1-203ENST00000520755 SLC25A36Q96CQ1 311 aa13.68□□□□□ -0.22
LSM1-203ENST00000520755 UCN2Q96RP3 112 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms