RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PRAMEF7Q5VXH5 474 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 MSANTD1Q6ZTZ1 278 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 SERPINA11Q86U17 422 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 C3orf49Q96BT1 292 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 FBXO17Q96EF6 278 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 MAELQ96JY0 434 aaKnown RBP13.25□□□□□ -0.29
CSMD1-207ENST00000520451 ALKBH3Q96Q83 286 aaPredicted RBP13.25□□□□□ -0.29
CSMD1-207ENST00000520451 SPATA9Q9BWV2 254 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 ARMC7Q9H6L4 198 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 OBP2BQ9NPH6 170 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 SDR39U1Q9NRG7 319 aaPredicted RBP13.25□□□□□ -0.29
CSMD1-207ENST00000520451 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
CSMD1-207ENST00000520451 THUMPD1Q9NXG2 353 aaKnown RBP13.25□□□□□ -0.29
CSMD1-207ENST00000520451 A0A096LPI6 279 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 A0A0G2JPF8 293 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 TMEM229AB2RXF0 380 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 HNRNPCL2B2RXH8 293 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 HNRNPCL3B7ZW38 293 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 UBDO15205 165 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 HNRNPCL1O60812 293 aaKnown RBP13.24□□□□□ -0.29
CSMD1-207ENST00000520451 NPIPB7O75200 414 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 LY6HO94772 140 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 VAMP5O95183 116 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 AHSA1O95433 338 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 HNRNPCL4P0DMR1 293 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 POLR2JP52435 117 aaKnown RBP13.24□□□□□ -0.29
CSMD1-207ENST00000520451 TBRG1Q3YBR2 411 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 NIPAL3Q6P499 406 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 CREB3L2Q70SY1 520 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 MAVSQ7Z434 540 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 OR9I1Q8NGQ6 314 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 OR1K1Q8NGR3 316 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 NANOS1Q8WY41 292 aaKnown RBP13.24□□□□□ -0.29
CSMD1-207ENST00000520451 VPS33AQ96AX1 596 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 SLC38A2Q96QD8 506 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 OR52B2Q96RD2 323 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 KCNS3Q9BQ31 491 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 NKIRAS1Q9NYS0 192 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 RASD1Q9Y272 281 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 IFT52Q9Y366 437 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 CHST2Q9Y4C5 530 aa13.24□□□□□ -0.29
CSMD1-207ENST00000520451 HEATR1Q9H583 2144 aaKnown RBP13.24□□□□□ -0.29
CSMD1-207ENST00000520451 IGHV1-18A0A0C4DH31 117 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 OR6C65A6NJZ3 312 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 UBE2NP61088 152 aaKnown RBP13.23□□□□□ -0.29
CSMD1-207ENST00000520451 HOXC5Q00444 222 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 MST1LQ2TV78 715 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 ZNF311Q5JNZ3 666 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 EPHX4Q8IUS5 362 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 MIER2Q8N344 545 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 STK35Q8TDR2 534 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 PROX1Q92786 737 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 SLC25A36Q96CQ1 311 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 BOD1Q96IK1 185 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 CDC42EP3Q9UKI2 254 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 FKBP7Q9Y680 259 aa13.23□□□□□ -0.29
CSMD1-207ENST00000520451 A0A096LPE4 126 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 A0A1W2PPZ6 126 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 UPK3AO75631 287 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 F12P00748 615 aaPredicted RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 NUDT7P0C024 238 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 PNMTP11086 282 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 ZNF16P17020 682 aaPredicted RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 USF1P22415 310 aaPredicted RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 GTF2E2P29084 291 aaKnown RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 RPS5P46782 204 aaKnown RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 MAGOHP61326 146 aaKnown RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 SNRPD2P62316 118 aaKnown RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 TUBA1BP68363 451 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 TUBA4AP68366 448 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 RGNQ15493 299 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 SWI5Q1ZZU3 235 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 CYB5R2Q6BCY4 276 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 TUBA1AQ71U36 451 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 LINGO2Q7L985 606 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 KDM8Q8N371 416 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 MFSD8Q8NHS3 518 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 GTF2H4Q92759 462 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 BCL2L2Q92843 193 aaPredicted RBP13.22□□□□□ -0.29
CSMD1-207ENST00000520451 MAL2Q969L2 176 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 KATNB1Q9BVA0 655 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 PTDSS2Q9BVG9 487 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 A4GALTQ9NPC4 353 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
CSMD1-207ENST00000520451 ARPC4-TTLL3A0A0A6YYG9 625 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 C5orf58C9J3I9 102 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 FTCDNL1E5RQL4 147 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 CLIC1O00299 241 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 NR5A2O00482 541 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 CRYAAP02489 173 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 FAM157CP0CG43 387 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 IGHV4-31P0DP07 118 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 SERPINF1P36955 418 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 PDLIM4P50479 330 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 SLC18A1P54219 525 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 CLDN17P56750 224 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 ROR2Q01974 943 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms