RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 NR1H2P55055 460 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 COPZ1P61923 177 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 EGR4Q05215 589 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 RUNX1T1Q06455 604 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 GCNT6Q5T4J0 391 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 ADAM5Q6NVV9 412 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 DHRS4L2Q6PKH6 230 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 PAQR6Q6TCH4 344 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 ZNF704Q6ZNC4 412 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-215ENST00000519474 OR8H2Q8N162 312 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 LRRC75A-AS1Q8N1F1 130 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 LSMEM1Q8N8F7 131 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 STK35Q8TDR2 534 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 NEUROG1Q92886 237 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 KISS1RQ969F8 398 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-215ENST00000519474 CPPED1Q9BRF8 314 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-215ENST00000519474 NPHS2Q9NP85 383 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 SLC7A10Q9NS82 523 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 LEF1Q9UJU2 399 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-215ENST00000519474 ANKHD1Q8IWZ3 2542 aaKnown RBP8.24□□□□□ -1.09
HDAC3-215ENST00000519474 DSCAMO60469 2012 aa8.24□□□□□ -1.09
HDAC3-215ENST00000519474 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 ARPC4-TTLL3A0A0A6YYG9 625 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 A0A0G2JND7 137 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 OR5H1A6NKK0 313 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 C5orf58C9J3I9 102 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 FBP2O00757 339 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 HS3ST1O14792 307 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 GPIP06744 558 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 UQCRBP14927 111 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 GGT1P19440 569 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 S100A1P23297 94 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 SLC6A2P23975 617 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 IDUAP35475 653 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 GZMMP51124 257 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 B2MP61769 119 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 RELQ04864 619 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 FAPQ12884 760 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 SCARB2Q14108 478 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 SELPLGQ14242 412 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 SPCS2Q15005 226 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 OR7A5Q15622 319 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 GABRA6Q16445 453 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 TIMM23BQ5SRD1 257 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 OTUD3Q5T2D3 398 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 TSPO2Q5TGU0 170 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 C1orf140Q5VVS0 124 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 SHEQ5VZ18 495 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 TMEM225Q6GV28 225 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 P2RY8Q86VZ1 359 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 PTOV1Q86YD1 416 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 SPARTQ8N0X7 666 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 UBE2J2Q8N2K1 259 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 ZNF611Q8N823 705 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 WDR31Q8NA23 367 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 OR8H1Q8NGG4 311 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 OR52E4Q8NGH9 312 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 AKAP1Q92667 903 aaKnown RBP eCLIP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 APH1AQ96BI3 265 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 ANKRD27Q96NW4 1050 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 ZNF385AQ96PM9 386 aaKnown RBP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 PTDSS2Q9BVG9 487 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 SF3B5Q9BWJ5 86 aaKnown RBP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 GSX1Q9H4S2 264 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 NGBQ9NPG2 151 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 PARPBPQ9NWS1 579 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 ASB6Q9NWX5 421 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 EMC3Q9P0I2 261 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 ATPIF1Q9UII2 106 aa8.23□□□□□ -1.09
HDAC3-215ENST00000519474 RAI1Q7Z5J4 1906 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-215ENST00000519474 AQP7P3A6NL99 342 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 CCT8L1PA6NM43 557 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 FTCDNL1E5RQL4 147 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 SMPD2O60906 423 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 ITGA5P08648 1049 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 HTR2AP28223 471 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 PCBP3P57721 371 aaKnown RBP8.22□□□□□ -1.09
HDAC3-215ENST00000519474 LTBQ06643 244 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 SF3A3Q12874 501 aaKnown RBP eCLIP8.22□□□□□ -1.092e-6■■■■□ 20.9
HDAC3-215ENST00000519474 CAPRIN1Q14444 709 aaKnown RBP8.22□□□□□ -1.09
HDAC3-215ENST00000519474 PPA1Q15181 289 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 DUSP7Q16829 419 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 CGB2Q6NT52 195 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 PRSS57Q6UWY2 283 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 C20orf204Q6ZNR8 217 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 CREB3L2Q70SY1 520 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 EPHX4Q8IUS5 362 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 SLC15A3Q8IY34 581 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 KDM8Q8N371 416 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 HIPK4Q8NE63 616 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 OR9K2Q8NGE7 335 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 SLC38A4Q969I6 547 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 TAAR8Q969N4 342 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 TMEM45BQ96B21 275 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 SLC25A36Q96CQ1 311 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 MUCL1Q96DR8 90 aa8.22□□□□□ -1.09
HDAC3-215ENST00000519474 KTI12Q96EK9 354 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms