RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 CLOCKO15516 846 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 EIF1BO60739 113 aaKnown RBP18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 CYTIPO60759 359 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 RCBTB2O95199 551 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 ASAH2BP0C7U1 165 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 FOXF2Q12947 444 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 ABLIM2Q6H8Q1 611 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 TMEM211Q6ICI0 200 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 GCNT2Q8N0V5 402 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 KDM8Q8N371 416 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 LRTOMTQ8WZ04 291 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 ZHX1-C8orf76Q96EF9 292 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 REEP1Q9H902 201 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 NANSQ9NR45 359 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 DNAJB9Q9UBS3 223 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 Q9UFV3 132 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 AQP7P3A6NL99 342 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 OR7A10O76100 309 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 MT-ATP6P00846 226 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 GPR4P46093 362 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 OMPP47874 163 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 SRSF1Q07955 248 aaKnown RBP eCLIP18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 RIPPLY2Q5TAB7 128 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 HMBOX1Q6NT76 420 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 RRM2BQ7LG56 351 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 MAMDC2Q7Z304 686 aaPredicted RBP18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 ZER1Q7Z7L7 766 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 INTS12Q96CB8 462 aaKnown RBP18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 FAM46AQ96IP4 442 aaKnown RBP18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 GPA33Q99795 319 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 PSD2Q9BQI7 771 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 NAA11Q9BSU3 229 aaPredicted RBP18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 FKRPQ9H9S5 495 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 CHST11Q9NPF2 352 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 TMCC3Q9ULS5 477 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 SLC5A6Q9Y289 635 aa18.71■□□□□ 0.59
TOP1MT-206ENST00000518951 ZNF716A6NP11 495 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 MS4A18H0YCH9 400 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 GNGT2O14610 69 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 CDC42EP2O14613 210 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 HNRNPRO43390 633 aaKnown RBP18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 IL2RAP01589 272 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 FCGR2AP12318 317 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 GTF2E2P29084 291 aaKnown RBP18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 RASGEF1BQ0VAM2 473 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 MFSD13AQ14CX5 517 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 GUSBP1Q15486 140 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 MS4A18Q3C1V0 323 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 TMPRSS11FQ6ZWK6 438 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 H1FNTQ75WM6 255 aaPredicted RBP18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 ZNF771Q7L3S4 317 aaPredicted RBP18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 AMIGO2Q86SJ2 522 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 CCDC71Q8IV32 467 aaPredicted RBP18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 SLC43A2Q8N370 569 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 LIPHQ8WWY8 451 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 ZNF775Q96BV0 537 aaPredicted RBP18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 MRPL39Q9NYK5 338 aaKnown RBP18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 ZNF229Q9UJW7 825 aa18.7■□□□□ 0.58
TOP1MT-206ENST00000518951 OR10H3O60404 316 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 HPRP00739 348 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 ATP6AP1Q15904 470 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 ZNF770Q6IQ21 691 aaPredicted RBP18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 HS3ST5Q8IZT8 346 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 SCAIQ8N9R8 606 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 OR9Q2Q8NGE9 314 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 OR5J2Q8NH18 312 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 PIGXQ8TBF5 258 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 RND1Q92730 232 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 ASPNQ9BXN1 380 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 S100A14Q9HCY8 104 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 C6orf203Q9P0P8 240 aaPredicted RBP18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 B3GALT5Q9Y2C3 310 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 CORINQ9Y5Q5 1042 aa18.69■□□□□ 0.58
TOP1MT-206ENST00000518951 PLPP3O14495 311 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 DEAF1O75398 565 aaPredicted RBP18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 LDLRP01130 860 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 TMIGD3P0DMS9 266 aaPredicted RBP18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 FASP25445 335 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 PER3P56645 1201 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 PMS2P3Q13401 168 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 FHL1Q13642 323 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 SLC17A1Q14916 467 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 RNPS1Q15287 305 aaKnown RBP18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 MICAQ29983 383 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 TMEM225Q6GV28 225 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 ZFP1Q6P2D0 407 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 TUSC5Q8IXB3 177 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 TAS2R5Q9NYW4 299 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 B3GAT1Q9P2W7 334 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 RNF6Q9Y252 685 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 MAGED1Q9Y5V3 778 aaPredicted RBP18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 TENM4Q6N022 2769 aa18.68■□□□□ 0.58
TOP1MT-206ENST00000518951 FREM1Q5H8C1 2179 aa18.67■□□□□ 0.58
TOP1MT-206ENST00000518951 HTR3EA5X5Y0 456 aa18.67■□□□□ 0.58
TOP1MT-206ENST00000518951 EFCAB9A8MZ26 197 aa18.67■□□□□ 0.58
TOP1MT-206ENST00000518951 KLF4O43474 513 aa18.67■□□□□ 0.58
TOP1MT-206ENST00000518951 RRP9O43818 475 aaKnown RBP18.67■□□□□ 0.58
TOP1MT-206ENST00000518951 SS18L1O75177 396 aaPredicted RBP18.67■□□□□ 0.58
TOP1MT-206ENST00000518951 CCNB2O95067 398 aa18.67■□□□□ 0.58
TOP1MT-206ENST00000518951 TSPAN19P0C672 248 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms