RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PCSK6P29122 969 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 MPGP29372 298 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 SELENOPP49908 381 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 MTPNP58546 118 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 IRX1P78414 480 aaPredicted RBP9.29□□□□□ -0.92
SPIDR-205ENST00000518060 LGALS3BPQ08380 585 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 SF3A3Q12874 501 aaKnown RBP eCLIP9.29□□□□□ -0.92
SPIDR-205ENST00000518060 CLEC12BQ2HXU8 276 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 PGGHGQ32M88 737 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 HIKESHIQ53FT3 197 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 ALG10BQ5I7T1 473 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 AGAP6Q5VW22 663 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 HMBOX1Q6NT76 420 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 DHRS4L2Q6PKH6 230 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 COMTD1Q86VU5 262 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 RANBP3LQ86VV4 465 aaPredicted RBP9.29□□□□□ -0.92
SPIDR-205ENST00000518060 KDM8Q8N371 416 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 C17orf78Q8N4C9 275 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 HIPK4Q8NE63 616 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 STK35Q8TDR2 534 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 KTI12Q96EK9 354 aaPredicted RBP9.29□□□□□ -0.92
SPIDR-205ENST00000518060 KCNS3Q9BQ31 491 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 VIPAS39Q9H9C1 493 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 TMEM27Q9HBJ8 222 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 SLC17A5Q9NRA2 495 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 MGAT4BQ9UQ53 548 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 AMDHD2Q9Y303 409 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 DSCAMO60469 2012 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 FREM1Q5H8C1 2179 aa9.29□□□□□ -0.92
SPIDR-205ENST00000518060 A0A096LPE4 126 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 A0A1W2PPZ6 126 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 M0R082 166 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 M0R3H8 397 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 AIM2O14862 343 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 TPST1O60507 370 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 EDF1O60869 148 aaKnown RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 VAMP5O95183 116 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 WNT11O96014 354 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 OPN1SWP03999 348 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 DANCRP0C864 163 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 H2AFXP16104 143 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 ZNF43P17038 809 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 FABP6P51161 128 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 CLDN17P56750 224 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 PRPS1P60891 318 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 UBE2NP61088 152 aaKnown RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 GLIPR1L2Q4G1C9 344 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 CREB3L2Q70SY1 520 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 FBXL14Q8N1E6 418 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 ZIC4Q8N9L1 334 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 SMYD1Q8NB12 490 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 C11orf65Q8NCR3 313 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 C1orf162Q8NEQ5 155 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 MFSD8Q8NHS3 518 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 ZNF417Q8TAU3 575 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 DNAJA4Q8WW22 397 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 IGFBPL1Q8WX77 278 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 SLC38A4Q969I6 547 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 SLC35B4Q969S0 331 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 MUS81Q96NY9 551 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 ZNF587Q96SQ5 575 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 TRAF4Q9BUZ4 470 aaPredicted RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 FKRPQ9H9S5 495 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 TMEM45AQ9NWC5 275 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 SEC14L4Q9UDX3 406 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 TESQ9UGI8 421 aaKnown RBP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 PRDM4Q9UKN5 801 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 PRR14LQ5THK1 2151 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 NIPBLQ6KC79 2804 aaeCLIP9.28□□□□□ -0.92
SPIDR-205ENST00000518060 ZFHX3Q15911 3703 aa9.28□□□□□ -0.92
SPIDR-205ENST00000518060 TRAV36DV7A0A075B6V5 113 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 TRBV5-3A0A0A0MS03 114 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 E7EQL1 145 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 ATP6V1G2-DDX39BF2Z307 99 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 PDLIM1O00151 329 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 AKAP8O43823 692 aaKnown RBP9.27□□□□□ -0.93
SPIDR-205ENST00000518060 OR2T1O43869 369 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 NPIPB7O75200 414 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 SLC43A1O75387 559 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 UPK3AO75631 287 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 SERPINI2O75830 405 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 IGHV4-39P01824 125 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 TROVE2P10155 538 aaKnown RBP eCLIP9.27□□□□□ -0.93
SPIDR-205ENST00000518060 PAX1P15863 534 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 HOXB4P17483 251 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-205ENST00000518060 GRPRP30550 384 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 ACVR1BP36896 505 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 P2RY4P51582 365 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 NUDT6P53370 316 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 TUBA1BP68363 451 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 TUBA4AP68366 448 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 PPP2R2BQ00005 443 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 SLC25A3Q00325 362 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 ROR2Q01974 943 aaKnown RBP9.27□□□□□ -0.93
SPIDR-205ENST00000518060 TNK1Q13470 666 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 SELPLGQ14242 412 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 ETFDHQ16134 617 aa9.27□□□□□ -0.93
SPIDR-205ENST00000518060 RUNDC3AQ59EK9 446 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms