RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 LRRC37BQ96QE4 947 aa9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 PRPF18Q99633 342 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 RBM4Q9BWF3 364 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 NOX3Q9HBY0 568 aa9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 POLE3Q9NRF9 147 aa9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 TREM2Q9NZC2 230 aa9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 USP22Q9UPT9 525 aa9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 GRIP1Q9Y3R0 1128 aa9.78□□□□□ -0.84
CTNNA1-205ENST00000517904 WNK2Q9Y3S1 2297 aa9.77□□□□□ -0.84
CTNNA1-205ENST00000517904 LOC105371242A0A075B767 164 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 TMEM229AB2RXF0 380 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 HPXP02790 462 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 GAAP10253 952 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 G6PDP11413 515 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 CBR1P16152 277 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 CREB1P16220 341 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 COL8A2P25067 703 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 POU3F1Q03052 451 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 SCGB2A2Q13296 93 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 SNTB2Q13425 540 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 PGS1Q32NB8 556 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 ATAD3BQ5T9A4 648 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 FAHD2BQ6P2I3 314 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 NIPAL3Q6P499 406 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 EPHX4Q8IUS5 362 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 FAHD2AQ96GK7 314 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 ZNF317Q96PQ6 595 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 MRPL37Q9BZE1 423 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 PIF1Q9H611 641 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 ESM1Q9NQ30 184 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 ADPRHL2Q9NX46 363 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 PCDHGB1Q9Y5G3 927 aa9.77□□□□□ -0.85
CTNNA1-205ENST00000517904 VSTM5A8MXK1 200 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 FAAHO00519 579 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 COPEO14579 308 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 TRIM13O60858 407 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 SCN2BO60939 215 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 AGR2O95994 175 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 PNPP00491 289 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 FAM153BP0C7A2 387 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 SAGP10523 405 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 TCN1P20061 433 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 ARRB2P32121 409 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 GPR6P46095 362 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 LIMS1P48059 325 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 MAP2K6P52564 334 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 LMO4P61968 165 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 ARF1P84077 181 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 DEFA6Q01524 100 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 ROR2Q01974 943 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 EPS8Q12929 822 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 NPRL3Q12980 569 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 BNIP2Q12982 314 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 DAG1Q14118 895 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 GPAT3Q53EU6 434 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 SAXO2Q658L1 398 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 TMEM225Q6GV28 225 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 KRT80Q6KB66 452 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 ANKRD46Q86W74 232 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 OR4A15Q8NGL6 344 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 OR51F2Q8NH61 342 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 YIPF5Q969M3 257 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 ZNF837Q96EG3 531 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 ZNF747Q9BV97 191 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 TXLNGYQ9BZA5 131 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 LINC00470Q9BZP3 86 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 ZNF696Q9H7X3 374 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 MOV10Q9HCE1 1003 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 G6PC2Q9NQR9 355 aa9.76□□□□□ -0.85
CTNNA1-205ENST00000517904 CFAP73A6NFT4 308 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 AGAP5A6NIR3 686 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 RPL36A-HNRNPH2H7BZ11 118 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 M0R233 179 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 HMGN4O00479 90 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 RNASET2O00584 256 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 FRS3O43559 492 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 SYNGR3O43761 229 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 TFP02787 698 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 KRT4P19013 534 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 ACHEP22303 614 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 ARR3P36575 388 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 ALDH3B1P43353 468 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 SEC24CP53992 1094 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 SH3BGRP55822 239 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 CLDN8P56748 225 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 HPCAP84074 193 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 SYPL1Q16563 259 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 WHAMMP3Q1A5X7 153 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 SLC9B1Q4ZJI4 515 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 ZCCHC23Q6ZST2 131 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 MDP1Q86V88 176 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 CMIPQ8IY22 773 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 CNPY4Q8N129 248 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 C4orf33Q8N1A6 199 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 ANKFN1Q8N957 763 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 ZDHHC22Q8N966 263 aa9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 MRPL24Q96A35 216 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-205ENST00000517904 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms