RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ZNF587Q96SQ5 575 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 PSD2Q9BQI7 771 aa8.82□□□□□ -1
CLN8-202ENST00000517514 TTYH2Q9BSA4 534 aa8.82□□□□□ -1
CLN8-202ENST00000517514 SEMA6AQ9H2E6 1030 aa8.82□□□□□ -1
CLN8-202ENST00000517514 TP63Q9H3D4 680 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 REEP1Q9H902 201 aa8.82□□□□□ -1
CLN8-202ENST00000517514 FKRPQ9H9S5 495 aa8.82□□□□□ -1
CLN8-202ENST00000517514 RNF122Q9H9V4 155 aa8.82□□□□□ -1
CLN8-202ENST00000517514 CALHM2Q9HA72 323 aa8.82□□□□□ -1
CLN8-202ENST00000517514 TAS2R5Q9NYW4 299 aa8.82□□□□□ -1
CLN8-202ENST00000517514 NKX1-2Q9UD57 310 aaPredicted RBP8.82□□□□□ -1
CLN8-202ENST00000517514 SH3BGRL2Q9UJC5 107 aa8.82□□□□□ -1
CLN8-202ENST00000517514 MEMO1Q9Y316 297 aa8.82□□□□□ -1
CLN8-202ENST00000517514 ZNF175Q9Y473 711 aa8.82□□□□□ -1
CLN8-202ENST00000517514 ALPK2Q86TB3 2170 aa8.82□□□□□ -1
CLN8-202ENST00000517514 PCNX1Q96RV3 2341 aa8.81□□□□□ -1
CLN8-202ENST00000517514 PLPP3O14495 311 aa8.81□□□□□ -1
CLN8-202ENST00000517514 OR2T1O43869 369 aa8.81□□□□□ -1
CLN8-202ENST00000517514 GABRA1P14867 456 aa8.81□□□□□ -1
CLN8-202ENST00000517514 EDNRAP25101 427 aa8.81□□□□□ -1
CLN8-202ENST00000517514 IFNA8P32881 189 aa8.81□□□□□ -1
CLN8-202ENST00000517514 RPS3AP61247 264 aaKnown RBP8.81□□□□□ -1
CLN8-202ENST00000517514 RPS4XP62701 263 aaKnown RBP8.81□□□□□ -1
CLN8-202ENST00000517514 CSNK2A1P68400 391 aaPredicted RBP8.81□□□□□ -1
CLN8-202ENST00000517514 ADORA2A-AS1P86434 159 aa8.81□□□□□ -1
CLN8-202ENST00000517514 RBPJQ06330 500 aa8.81□□□□□ -1
CLN8-202ENST00000517514 SRSF1Q07955 248 aaKnown RBP eCLIP8.81□□□□□ -1
CLN8-202ENST00000517514 FOXF2Q12947 444 aa8.81□□□□□ -1
CLN8-202ENST00000517514 MICAQ29983 383 aa8.81□□□□□ -1
CLN8-202ENST00000517514 SHQ1Q6PI26 577 aaKnown RBP8.81□□□□□ -1
CLN8-202ENST00000517514 FCRLAQ7L513 359 aa8.81□□□□□ -1
CLN8-202ENST00000517514 KIF18BQ86Y91 864 aa8.81□□□□□ -1
CLN8-202ENST00000517514 PQLC1Q8N2U9 271 aa8.81□□□□□ -1
CLN8-202ENST00000517514 LRRC75AQ8NAA5 344 aa8.81□□□□□ -1
CLN8-202ENST00000517514 OR13C2Q8NGS9 318 aa8.81□□□□□ -1
CLN8-202ENST00000517514 OR5K1Q8NHB7 308 aa8.81□□□□□ -1
CLN8-202ENST00000517514 ABHD3Q8WU67 409 aa8.81□□□□□ -1
CLN8-202ENST00000517514 WNT2BQ93097 391 aa8.81□□□□□ -1
CLN8-202ENST00000517514 CPNE4Q96A23 557 aaPredicted RBP8.81□□□□□ -1
CLN8-202ENST00000517514 CENPNQ96H22 339 aaPredicted RBP8.81□□□□□ -1
CLN8-202ENST00000517514 TNFRSF13CQ96RJ3 184 aa8.81□□□□□ -1
CLN8-202ENST00000517514 NIPSNAP1Q9BPW8 284 aa8.81□□□□□ -1
CLN8-202ENST00000517514 YY1AP1Q9H869 796 aa8.81□□□□□ -1
CLN8-202ENST00000517514 MCCC2Q9HCC0 563 aa8.81□□□□□ -1
CLN8-202ENST00000517514 CHST11Q9NPF2 352 aa8.81□□□□□ -1
CLN8-202ENST00000517514 FANCFQ9NPI8 374 aa8.81□□□□□ -1
CLN8-202ENST00000517514 MRPL39Q9NYK5 338 aaKnown RBP8.81□□□□□ -1
CLN8-202ENST00000517514 KLHL13Q9P2N7 655 aa8.81□□□□□ -1
CLN8-202ENST00000517514 STOML1Q9UBI4 398 aa8.81□□□□□ -1
CLN8-202ENST00000517514 REV1Q9UBZ9 1251 aa8.81□□□□□ -1
CLN8-202ENST00000517514 ZNF229Q9UJW7 825 aa8.81□□□□□ -1
CLN8-202ENST00000517514 IGKV3D-15A0A087WSY6 115 aa8.8□□□□□ -1
CLN8-202ENST00000517514 TRAV27A0A087WT01 109 aa8.8□□□□□ -1
CLN8-202ENST00000517514 TRGV8A0A0C4DH27 118 aa8.8□□□□□ -1
CLN8-202ENST00000517514 A0A0G2JNJ9 132 aa8.8□□□□□ -1
CLN8-202ENST00000517514 HTR3EA5X5Y0 456 aa8.8□□□□□ -1
CLN8-202ENST00000517514 ARRDC5A6NEK1 342 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SLC22A20A6NK97 555 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SAC3D1A6NKF1 404 aa8.8□□□□□ -1
CLN8-202ENST00000517514 FIGNL2A6NMB9 653 aa8.8□□□□□ -1
CLN8-202ENST00000517514 EIF4E1BA6NMX2 242 aaKnown RBP8.8□□□□□ -1
CLN8-202ENST00000517514 E9PLN8 166 aa8.8□□□□□ -1
CLN8-202ENST00000517514 PDLIM1O00151 329 aa8.8□□□□□ -1
CLN8-202ENST00000517514 TRAF3IP2O43734 574 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 OR10H3O60404 316 aa8.8□□□□□ -1
CLN8-202ENST00000517514 CCNB2O95067 398 aa8.8□□□□□ -1
CLN8-202ENST00000517514 RCBTB2O95199 551 aa8.8□□□□□ -1
CLN8-202ENST00000517514 MT-ATP6P00846 226 aa8.8□□□□□ -1
CLN8-202ENST00000517514 IGFBP1P08833 259 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 HOXD4P09016 255 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 FCGR1AP12314 374 aa8.8□□□□□ -1
CLN8-202ENST00000517514 PLA2G2AP14555 144 aa8.8□□□□□ -1
CLN8-202ENST00000517514 ANPEPP15144 967 aa8.8□□□□□ -1
CLN8-202ENST00000517514 FPR3P25089 353 aa8.8□□□□□ -1
CLN8-202ENST00000517514 PTGER4P35408 488 aa8.8□□□□□ -1
CLN8-202ENST00000517514 AQP2P41181 271 aa8.8□□□□□ -1
CLN8-202ENST00000517514 KIR2DL2P43627 348 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 DAPP51397 102 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SLC16A1P53985 500 aa8.8□□□□□ -1
CLN8-202ENST00000517514 ZP4Q12836 540 aa8.8□□□□□ -1
CLN8-202ENST00000517514 GK3PQ14409 553 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SLC17A1Q14916 467 aa8.8□□□□□ -1
CLN8-202ENST00000517514 RCN1Q15293 331 aa8.8□□□□□ -1
CLN8-202ENST00000517514 CDSNQ15517 529 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SGCBQ16585 318 aa8.8□□□□□ -1
CLN8-202ENST00000517514 OTUD3Q5T2D3 398 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 PDSS1Q5T2R2 415 aa8.8□□□□□ -1
CLN8-202ENST00000517514 FAHD1Q6P587 224 aa8.8□□□□□ -1
CLN8-202ENST00000517514 B3GNT6Q6ZMB0 384 aa8.8□□□□□ -1
CLN8-202ENST00000517514 THSD4Q6ZMP0 1018 aa8.8□□□□□ -1
CLN8-202ENST00000517514 H1FNTQ75WM6 255 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 C10orf53Q8N6V4 93 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SCAIQ8N9R8 606 aa8.8□□□□□ -1
CLN8-202ENST00000517514 AQP11Q8NBQ7 271 aa8.8□□□□□ -1
CLN8-202ENST00000517514 ADPRHL1Q8NDY3 354 aa8.8□□□□□ -1
CLN8-202ENST00000517514 OR10G2Q8NGC3 310 aa8.8□□□□□ -1
CLN8-202ENST00000517514 OR8D4Q8NGM9 314 aa8.8□□□□□ -1
CLN8-202ENST00000517514 OR5J2Q8NH18 312 aa8.8□□□□□ -1
CLN8-202ENST00000517514 PIGXQ8TBF5 258 aa8.8□□□□□ -1
CLN8-202ENST00000517514 GIPC3Q8TF64 312 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms