RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 IL10RBQ08334 325 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 EXOSC2Q13868 293 aaKnown RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 GK3PQ14409 553 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 GRM3Q14832 879 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 P2RY14Q15391 338 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 ASTE1Q2TB18 679 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 KLHL40Q2TBA0 621 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 TMEM249Q2WGJ8 235 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 KLK9Q2XQG4 91 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 KRTAP6-2Q3LI66 62 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 TEX44Q53QW1 395 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 C6orf52Q5T4I8 152 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 LYPLAL1Q5VWZ2 237 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SPECC1LQ69YQ0 1117 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 DHRS7BQ6IAN0 325 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 KIAA0930Q6ICG6 404 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 MOXD1Q6UVY6 613 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 ATRAIDQ6UW56 229 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 H2AFVQ71UI9 128 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 CHST3Q7LGC8 479 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SLC16A13Q7RTY0 426 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 ITIH5Q86UX2 942 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 CBWD2Q8IUF1 395 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 PEX5LQ8IYB4 626 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 C1orf158Q8N1D5 194 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 MRPL43Q8N983 215 aaKnown RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SYT2Q8N9I0 419 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SLC26A10Q8NG04 563 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 OR2V1Q8NHB1 315 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SPACA4Q8TDM5 124 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SLC26A7Q8TE54 656 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 GRK7Q8WTQ7 553 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SLC5A11Q8WWX8 675 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 P2RX5Q93086 422 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 RMDN1Q96DB5 314 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 C1orf74Q96LT6 269 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 MBOAT7Q96N66 472 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 FTOQ9C0B1 505 aaKnown RBP eCLIP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 RAB17Q9H0T7 212 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 TMEM38AQ9H6F2 299 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 OPA3Q9H6K4 179 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 CSNK1G1Q9HCP0 422 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SLCO1B3Q9NPD5 702 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 AGPAT4Q9NRZ5 378 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 RRP7BPQ9NSQ0 103 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 PDP1Q9P0J1 537 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 LHX3Q9UBR4 397 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 HMGXB4Q9UGU5 601 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 SUN2Q9UH99 717 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 PRKAB1Q9Y478 270 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 CSDC2Q9Y534 153 aaKnown RBP-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 RPS6KL1Q9Y6S9 549 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 CSMD3Q7Z407 3707 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 COL12A1Q99715 3063 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 VWA8A3KMH1 1905 aa-1.34□□□□□ -2.62
RNU6-1238P-201ENST00000517215 TSPOAP1O95153 1857 aa-1.35□□□□□ -2.62
RNU6-1238P-201ENST00000517215 DNAH3Q8TD57 4116 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 DENND4BO75064 1496 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 KDM6BO15054 1643 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GLYATL1P3A0A0U1RQE8 302 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LOC100131303A0A0U1RQF7 123 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MDFIC2A0A1B0GVS7 189 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 PP2D1A8MPX8 630 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 F8VP50 259 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ZNF208O43345 1280 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 OR7C2O60412 319 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 DIAPH2O60879 1101 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RAMP1O60894 148 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 TPPPO94811 219 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GABARAPO95166 117 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ZWINTO95229 277 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IGLV3-25P01717 112 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IGHV3-53P01767 116 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CT62P0C5K7 136 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 STAG3L1P0CL83 205 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 SMIM10L1P0DMW3 83 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IGHV3-43DP0DP04 118 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 THRAP10827 490 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 HPGDP15428 266 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CD80P33681 288 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 HOXD13P35453 343 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RAD52P43351 418 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ASCL1P50553 236 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CCR4P51679 360 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 CLDN6P56747 220 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RWDD2BP57060 319 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RPL7AP62424 266 aaKnown RBP-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RPP38P78345 283 aaKnown RBP-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 IRF8Q02556 426 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GOLGA8DPQ0D2H9 430 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 HSPB3Q12988 150 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MAB21L1Q13394 359 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ALCAMQ13740 583 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 GINS1Q14691 196 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 MEF2DQ14814 521 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 LRIT3Q3SXY7 679 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 ACSBG2Q5FVE4 666 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 RNASE13Q5GAN3 156 aaKnown RBP-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 FAM27D1Q5T7N8 215 aa-1.35□□□□□ -2.63
RNU6-1238P-201ENST00000517215 DDI2Q5TDH0 399 aa-1.35□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms