RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 AADACL4Q5VUY2 407 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC6A19Q695T7 634 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 C3orf33Q6P1S2 294 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NIPAL3Q6P499 406 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TUBA3EQ6PEY2 450 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 BORAQ6PGQ7 559 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LINC00696Q6ZRV3 163 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ZNF227Q86WZ6 799 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GTPBP8Q8N3Z3 284 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 LRRC75AQ8NAA5 344 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FAM98AQ8NCA5 519 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ATP6V1C2Q8NEY4 427 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR52E2Q8NGJ4 325 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR5M1Q8NGP8 315 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 OR5J2Q8NH18 312 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MFSD8Q8NHS3 518 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 POC1BQ8TC44 478 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 SLC25A43Q8WUT9 341 aaPredicted RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FAR1Q8WVX9 515 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 FCGR1BQ92637 280 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MUL1Q969V5 352 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DTNBP1Q96EV8 351 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 RNFT2Q96EX2 444 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DNAJA3Q96EY1 480 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 GNRHR2Q96P88 292 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NPAS1Q99742 590 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KATNB1Q9BVA0 655 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 TAPBPLQ9BX59 468 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 POTEKPQ9BYX7 375 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ACOT13Q9NPJ3 140 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 NRIP3Q9NQ35 241 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 KLHL1Q9NR64 748 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 MRPL39Q9NYK5 338 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 DKKL1Q9UK85 242 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 ADAM18Q9Y3Q7 739 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CORINQ9Y5Q5 1042 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 IER3IP1Q9Y5U9 82 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 COMMD3-BMI1R4GMX3 469 aa6.9□□□□□ -1.3
SCARNA20.1-201ENST00000516009 CNTRLQ7Z7A1 2325 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 A0A0G2JMM0 328 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 A0A1W2PPB8 328 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 A0A1W2PRS3 328 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SLC22A31A6NKX4 558 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 A6NL46 340 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 ZNF891A8MT65 544 aaPredicted RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 KIR3DP1A8MWS1 328 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 FTCDNL1E5RQL4 147 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 H3BML4 177 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 M0R082 166 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 EFNA2O43921 213 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 NEURL1O76050 574 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SEC14L2O76054 403 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 INMTO95050 263 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 RAB36O95755 333 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 F10P00742 488 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 F13BP05160 661 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 TSPAN19P0C672 248 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 ADORA3P0DMS8 318 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 HIST1H1CP16403 213 aaKnown RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 ZNF17P17021 662 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 CNR1P21554 472 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SDHAP31040 664 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SRD5A2P31213 254 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 CLK1P49759 484 aaKnown RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 LGALS3BPQ08380 585 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 RAB40BQ12829 278 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 FOXC1Q12948 553 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SRSF6Q13247 344 aaKnown RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 TMED1Q13445 227 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 IRF3Q14653 427 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 TOMM20Q15388 145 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 OR1C1Q15619 314 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 OR7A5Q15622 319 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 KLHL12Q53G59 568 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 EMC4Q5J8M3 183 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 ZNF362Q5T0B9 420 aaPredicted RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 ARMC4Q5T2S8 1044 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 AGAP7PQ5VUJ5 663 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 RAET1LQ5VY80 246 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 FOXB2Q5VYV0 432 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 GPR139Q6DWJ6 353 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 GTF2IRD2BQ6EKJ0 949 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SPINK14Q6IE38 97 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 MEPCEQ7L2J0 689 aaKnown RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 GTF2IRD2Q86UP8 949 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 CLVS1Q8IUQ0 354 aaPredicted RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SCAIQ8N9R8 606 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 CYB561A3Q8NBI2 242 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SLC37A3Q8NCC5 494 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 LSM14AQ8ND56 463 aaKnown RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 SDR9C7Q8NEX9 313 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 BBS1Q8NFJ9 593 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 OR52I1Q8NGK6 324 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 OR4K13Q8NH42 304 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 ZNF417Q8TAU3 575 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 DGCR14Q96DF8 476 aaKnown RBP6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 LGALS12Q96DT0 336 aa6.89□□□□□ -1.31
SCARNA20.1-201ENST00000516009 CRELD1Q96HD1 420 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms