RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	LINGO2	Q7L985	606 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	SPATA21	Q7Z572	469 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	TRNT1	Q96Q11	434 aa	Known RBP	13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	SLC35A5	Q9BS91	424 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	DPY30	Q9C005	99 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	SLC38A1	Q9H2H9	487 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	SEC61A2	Q9H9S3	476 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	DYNLRB1	Q9NP97	96 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	ADPRHL2	Q9NX46	363 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	SLC17A7	Q9P2U7	560 aa		13.64	□□□□□ -0.23
LMNA-223	ENST00000515459	TMEM129	A0AVI4	362 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459		B4DSR2	109 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	UPK3A	O75631	287 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	SH3BGR	P55822	239 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	CASP8	Q14790	479 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	SYPL1	Q16563	259 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	FAM174B	Q3ZCQ3	159 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	MRPL2	Q5T653	305 aa	Known RBP	13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	DEF8	Q6ZN54	512 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	ANKFN1	Q8N957	763 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	SEMA6D	Q8NFY4	1073 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	ZMYND19	Q96E35	227 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	NELFA	Q9H3P2	528 aa		13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	METTL17	Q9H7H0	456 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-223	ENST00000515459	CELA3B	P08861	270 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	CBR1	P16152	277 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	RPS4Y1	P22090	263 aa	Known RBP	13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	P2RY4	P51582	365 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	ROR2	Q01974	943 aa	Known RBP	13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	SCGB2A2	Q13296	93 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	PRAMEF8	Q5VWM4	474 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	PRAMEF7	Q5VXH5	474 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	LRRC74B	Q6ZQY2	392 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	MYPOP	Q86VE0	399 aa	Predicted RBP	13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	GLCCI1	Q86VQ1	547 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	RNF130	Q86XS8	419 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	EPHX4	Q8IUS5	362 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	ZNF440	Q8IYI8	595 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	CKAP2	Q8WWK9	683 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	TESC	Q96BS2	214 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	ZIM3	Q96PE6	472 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	LINC00470	Q9BZP3	86 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	PRDM4	Q9UKN5	801 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	TENM1	Q9UKZ4	2725 aa		13.62	□□□□□ -0.23
LMNA-223	ENST00000515459	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	TLDC2	A0PJX2	215 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459		A8MVM7	634 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	LYNX1	G3V0Z9	82 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	DBI	P07108	87 aa	Known RBP	13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	CHRM4	P08173	479 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	IGFBP1	P08833	259 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	ADRA2A	P08913	450 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	NUDT17	P0C025	328 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	LYNX1	P0DP58	116 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	ARR3	P36575	388 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	COMP	P49747	757 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	ANXA11	P50995	505 aa	Known RBP	13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	ACTG1	P63261	375 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	IL1RL1	Q01638	556 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	BNIP2	Q12982	314 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	DPY19L1	Q2PZI1	675 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	WBP2NL	Q6ICG8	309 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	CDK20	Q8IZL9	346 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	CADM2	Q8N3J6	435 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	C3orf56	Q8N813	242 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	ANKK1	Q8NFD2	765 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	TCP10L	Q8TDR4	215 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	PPP1R36	Q96LQ0	422 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	AKTIP	Q9H8T0	292 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	RLIM	Q9NVW2	624 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	RASD1	Q9Y272	281 aa		13.61	□□□□□ -0.23
LMNA-223	ENST00000515459	RPL36A-HNRNPH2	H7BZ11	118 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	FRS3	O43559	492 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	SPAG7	O75391	227 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	C1QC	P02747	245 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	GKN3P	P0CG01	181 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	COPZ1	P61923	177 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	TXNL4A	P83876	142 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	ARF1	P84077	181 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	POU3F1	Q03052	451 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	SNTB2	Q13425	540 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	DAG1	Q14118	895 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	PDCD2	Q16342	344 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	SPANXN4	Q5MJ08	99 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	C1orf140	Q5VVS0	124 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	PEX5L	Q8IYB4	626 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	TRIML2	Q8N7C3	387 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	EIF1AD	Q8N9N8	165 aa	Known RBP	13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	IL17RD	Q8NFM7	739 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	SGMS2	Q8NHU3	365 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	ZNF418	Q8TF45	676 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	TMEM186	Q96B77	213 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	TPK1	Q9H3S4	243 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459	CMAHP	Q9Y471	501 aa		13.6	□□□□□ -0.23
LMNA-223	ENST00000515459		A0A096LPI6	279 aa		13.59	□□□□□ -0.23
LMNA-223	ENST00000515459	CDHR4	A6H8M9	788 aa		13.59	□□□□□ -0.23
LMNA-223	ENST00000515459	TMEM229A	B2RXF0	380 aa		13.59	□□□□□ -0.23
LMNA-223	ENST00000515459	TFPT	P0C1Z6	253 aa		13.59	□□□□□ -0.23
LMNA-223	ENST00000515459	NR2F1	P10589	423 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms