RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 UBXN2BQ14CS0 331 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 ALG10Q5BKT4 473 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 FAM27D1Q5T7N8 215 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 TIGD3Q6B0B8 471 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 LEG1Q6P5S2 330 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 D2HGDHQ8N465 521 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 LRRC75AQ8NAA5 344 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 OR6K6Q8NGW6 343 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 MOSPD2Q8NHP6 518 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 ZNF563Q8TA94 476 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 ZNF721Q8TF20 911 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
NUP54-217ENST00000514987 ALG12Q9BV10 488 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 MRI1Q9BV20 369 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 ADAM19Q9H013 955 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 MARCH7Q9H992 704 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 FKRPQ9H9S5 495 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 ZNF304Q9HCX3 659 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 REV3LO60673 3130 aa13.55□□□□□ -0.24
NUP54-217ENST00000514987 COL5A1P20908 1838 aaPredicted RBP13.55□□□□□ -0.24
NUP54-217ENST00000514987 IGHV1OR21-1A0A087WYE8 117 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 ARPC4-TTLL3A0A0A6YYG9 625 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 TEX13CA0A0J9YWL9 993 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 TCRBV16S1A1N1A0A5B0 115 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 LRRN3E7EW58 273 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 BLOC1S5-TXNDC5H3BN57 136 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 CPNE3O75131 537 aaKnown RBP13.54□□□□□ -0.24
NUP54-217ENST00000514987 EPXP11678 715 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 MAOBP27338 520 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 AQP2P41181 271 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 OR10A3P58181 314 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 CTXN1P60606 82 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 HSD17B12Q53GQ0 312 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 YIF1BQ5BJH7 314 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 NKAIN2Q5VXU1 208 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 FAM122BQ7Z309 247 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 FAM220AQ7Z4H9 259 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 GATSQ8NAP1 163 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 OR2T4Q8NH00 348 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 C1orf216Q8TAB5 229 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 UBASH3BQ8TF42 649 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 SMAP2Q8WU79 429 aaPredicted RBP13.54□□□□□ -0.24
NUP54-217ENST00000514987 CAPSLQ8WWF8 208 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 RASD2Q96D21 266 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 CLIP3Q96DZ5 547 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 LRRN3Q9H3W5 708 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 UBE2ZQ9H832 354 aaPredicted RBP13.54□□□□□ -0.24
NUP54-217ENST00000514987 COPS7AQ9UBW8 275 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 ZNF281Q9Y2X9 895 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 NUP210LQ5VU65 1888 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 CDH23Q9H251 3354 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 CEP290O15078 2479 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 HSPB2A8KAH6 182 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 OIP5O43482 229 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 HYAL3O43820 417 aaPredicted RBP13.54□□□□□ -0.24
NUP54-217ENST00000514987 CDC40O60508 579 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUP54-217ENST00000514987 SELENOFO60613 162 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 UBL3O95164 117 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 RENP00797 406 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 YES1P07947 543 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 GLB1P16278 677 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 AHCYP23526 432 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 OR1D4P47884 311 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 HCCSP53701 268 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 HSPB2Q16082 182 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 TATDN3Q17R31 274 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 SNAP47Q5SQN1 464 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 LINC01590Q5TEZ4 76 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 SLC29A4Q7RTT9 530 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 PRSS42Q7Z5A4 293 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 NANOGNBQ7Z5D8 188 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 TCTE3Q8IZS6 198 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 RFLNBQ8N5W9 214 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 EXD3Q8N9H8 876 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 OR51L1Q8NGJ5 315 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 ADAMTS14Q8WXS8 1223 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 Q96M85 177 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 LMF1Q96S06 567 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 ADOQ96SZ5 270 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 NLKQ9UBE8 527 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 GRHPRQ9UBQ7 328 aa13.54□□□□□ -0.24
NUP54-217ENST00000514987 NUFIP1Q9UHK0 495 aaKnown RBP13.54□□□□□ -0.24
NUP54-217ENST00000514987 BRWD1Q9NSI6 2320 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 TMEM265A0A087WTH1 108 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 PHYHO14832 338 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 CTDSPLO15194 276 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 TSPAN2O60636 221 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 MT-ATP6P00846 226 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 PGCP20142 388 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 CXCR1P25024 350 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 MAPK3P27361 379 aaPredicted RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 TACR3P29371 465 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 SLC6A1P30531 599 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 MMP15P51511 669 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 NKX2-5P52952 324 aaPredicted RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 PNLIPRP2P54317 469 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 OR1D5P58170 312 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 STARD6P59095 220 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 RPS11P62280 158 aaKnown RBP eCLIP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms