RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TMPRSS11AQ6ZMR5 421 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 C16orf47Q6ZP98 133 aaPredicted RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 HIST3H2AQ7L7L0 130 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 PIP4P1Q86T03 277 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 CROCCP3Q8IVE0 287 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 ESX1Q8N693 406 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 SIRT6Q8N6T7 355 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 EXD3Q8N9H8 876 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 FADS6Q8N9I5 356 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 NPEPL1Q8NDH3 523 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 OR4F15Q8NGB8 312 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 OR52E2Q8NGJ4 325 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 NDNFQ8TB73 568 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 RPL3LQ92901 407 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 HIST1H2ACQ93077 130 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 TAAR8Q969N4 342 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 KTI12Q96EK9 354 aaPredicted RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 MRGPRX4Q96LA9 322 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 MOGAT1Q96PD6 335 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 KLHDC3Q9BQ90 382 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 PTDSS2Q9BVG9 487 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 HCAR1Q9BXC0 346 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 GPR87Q9BY21 358 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 SLIRPQ9GZT3 109 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 OR51E2Q9H255 320 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 DCSTAMPQ9H295 470 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 MMP27Q9H306 513 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 PLGRKTQ9HBL7 147 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 ADGRL4Q9HBW9 690 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 PALMDQ9NP74 551 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 FANCFQ9NPI8 374 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 ASB6Q9NWX5 421 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 TOR4AQ9NXH8 423 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 TCFL5Q9UL49 500 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 FARSAQ9Y285 508 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 SF3B6Q9Y3B4 125 aaKnown RBP7.59□□□□□ -1.19
RNF4-220ENST00000513578 NOX1Q9Y5S8 564 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 WIF1Q9Y5W5 379 aa7.59□□□□□ -1.19
RNF4-220ENST00000513578 A0A087WZY1 265 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 NSG1A0A0A6YYJ2 146 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ANKRD33BA6NCL7 494 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 METTL15A6NJ78 407 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 C21orf140B9A014 251 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 C9orf172C9J069 976 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 LRRN3E7EW58 273 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 AKAP8O43823 692 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 ITGA10O75578 1167 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 GPX5O75715 221 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 GLCEO94923 617 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 AHSA1O95433 338 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 NUDT14O95848 222 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 CD1AP06126 327 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 OR2T7P0C7T2 308 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 JMJD7P0C870 316 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 HSMCR30P0CW71 290 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 NR4A1P22736 598 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ADH6P28332 368 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 FGF9P31371 208 aaPredicted RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 ATP6V1E1P36543 226 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 AQP2P41181 271 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 CASP3P42574 277 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 CRYBB2P43320 205 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ID4P47928 161 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 CENPAP49450 140 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 MLF1P58340 268 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 CTXN1P60606 82 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 HSF2Q03933 536 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 RPL18Q07020 188 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 DCTN2Q13561 401 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 GALEQ14376 348 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 PON3Q15166 354 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ZNF239Q16600 458 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 FAM69BQ5VUD6 431 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 C1orf140Q5VVS0 124 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ZNF322Q6U7Q0 402 aaPredicted RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 TIPARPQ7Z3E1 657 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 NANOGNBQ7Z5D8 188 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 PPP1R32Q7Z5V6 425 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 ADCK1Q86TW2 530 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 GPALPP1Q8IXQ4 340 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 SYS1Q8N2H4 156 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 AMER2Q8N7J2 671 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 SCAIQ8N9R8 606 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 FAM98AQ8NCA5 519 aaKnown RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 OR2M3Q8NG83 312 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 OR6Q1Q8NGQ2 317 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 OR2T27Q8NH04 317 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 OR5J2Q8NH18 312 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 MOSPD2Q8NHP6 518 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 MFSD8Q8NHS3 518 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 THAP3Q8WTV1 239 aaPredicted RBP7.58□□□□□ -1.2
RNF4-220ENST00000513578 CT55Q8WUE5 264 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 S100ZQ8WXG8 99 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 TM9SF4Q92544 642 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 UFD1Q92890 307 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 RNF31Q96EP0 1072 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 TIMP4Q99727 224 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 PRRX2Q99811 253 aa7.58□□□□□ -1.2
RNF4-220ENST00000513578 MED18Q9BUE0 208 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms