RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 DEFB108AA8MXU0 73 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 LRRN3E7EW58 273 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 M0R082 166 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 CXCR6O00574 342 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 IFNA14P01570 189 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 NCK1P16333 377 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 CRYGSP22914 178 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 IL1RL1Q01638 556 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 P2RY6Q15077 328 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 FBXW9Q5XUX1 488 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 Q6ZT83 130 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 BHLHA15Q7RTS1 189 aaPredicted RBP12.35□□□□□ -0.43
DDX41-212ENST00000511040 AAED1Q7RTV5 226 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 STEAP2Q8NFT2 490 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 ZNF417Q8TAU3 575 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 ADAMTS16Q8TE57 1224 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 ZNF587Q96SQ5 575 aaPredicted RBP12.35□□□□□ -0.43
DDX41-212ENST00000511040 KCTD14Q9BQ13 255 aaPredicted RBP12.35□□□□□ -0.43
DDX41-212ENST00000511040 ALG2Q9H553 416 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 ADA2Q9NZK5 511 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 SLC7A7Q9UM01 511 aa12.35□□□□□ -0.43
DDX41-212ENST00000511040 PDZD2O15018 2839 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 KPNA4O00629 521 aaPredicted RBP12.34□□□□□ -0.43
DDX41-212ENST00000511040 CHP2O43745 196 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 DCTN3O75935 186 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 ZNF682O95780 498 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 BGLAPP02818 100 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 PPP3CBP16298 524 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 FOXG1P55316 489 aaPredicted RBP12.34□□□□□ -0.43
DDX41-212ENST00000511040 LTBQ06643 244 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 LGALS3BPQ08380 585 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 FAPQ12884 760 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 ITGADQ13349 1161 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 STK11Q15831 433 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 SWT1Q5T5J6 900 aaKnown RBP12.34□□□□□ -0.43
DDX41-212ENST00000511040 FAM69AQ5T7M9 428 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 C5orf46Q6UWT4 87 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 CREB3L2Q70SY1 520 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 VTCN1Q7Z7D3 282 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 EPHX4Q8IUS5 362 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 RNF148Q8N7C7 305 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 SLC41A3Q96GZ6 507 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 MOGAT1Q96PD6 335 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 HS3ST6Q96QI5 342 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 EPYCQ99645 322 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 TMEM43Q9BTV4 400 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 SF3B5Q9BWJ5 86 aaKnown RBP12.34□□□□□ -0.43
DDX41-212ENST00000511040 HDHD5Q9BXW7 423 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 TAGLN3Q9UI15 199 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 PRR14LQ5THK1 2151 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 POLQO75417 2590 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 TACC2O95359 2948 aa12.34□□□□□ -0.43
DDX41-212ENST00000511040 OR2T1O43869 369 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 DNAJA1P31689 397 aaKnown RBP12.33□□□□□ -0.44
DDX41-212ENST00000511040 TAS2R41P59536 307 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 PIN1Q13526 163 aaPredicted RBP12.33□□□□□ -0.44
DDX41-212ENST00000511040 TSPO2Q5TGU0 170 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 LINC00114Q6XXX2 140 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 ZNF433Q8N7K0 673 aaPredicted RBP12.33□□□□□ -0.44
DDX41-212ENST00000511040 FAM162AQ96A26 154 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 TMEM45BQ96B21 275 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 PCDHAC1Q9H158 963 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 SPAG4Q9NPE6 437 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 SLC7A10Q9NS82 523 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 PARPBPQ9NWS1 579 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 ASB6Q9NWX5 421 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 ABCD2Q9UBJ2 740 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 UPB1Q9UBR1 384 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 EGFL7Q9UHF1 273 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 PLEKHA6Q9Y2H5 1048 aa12.33□□□□□ -0.44
DDX41-212ENST00000511040 ABCA4P78363 2273 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 CIB4A0PJX0 185 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 KLF4O43474 513 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 RAD51DO75771 328 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 VAMP5O95183 116 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 FAM107AO95990 144 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 CH25HO95992 272 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 HPRP00739 348 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 SERPINA1P01009 418 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 NQO1P15559 274 aaKnown RBP12.32□□□□□ -0.44
DDX41-212ENST00000511040 GGT1P19440 569 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 COX5AP20674 150 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 LOXP28300 417 aaPredicted RBP12.32□□□□□ -0.44
DDX41-212ENST00000511040 YAP1P46937 504 aaKnown RBP12.32□□□□□ -0.44
DDX41-212ENST00000511040 SELENOPP49908 381 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 CLDN17P56750 224 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 SELENOWP63302 87 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 SLC25A3Q00325 362 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 PMS2P3Q13401 168 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 C1DQ13901 141 aaKnown RBP12.32□□□□□ -0.44
DDX41-212ENST00000511040 TAB1Q15750 504 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 GKAP1Q5VSY0 366 aaPredicted RBP12.32□□□□□ -0.44
DDX41-212ENST00000511040 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 TTC33Q6PID6 262 aaPredicted RBP12.32□□□□□ -0.44
DDX41-212ENST00000511040 H1FNTQ75WM6 255 aaPredicted RBP12.32□□□□□ -0.44
DDX41-212ENST00000511040 CCDC197Q8NCU1 140 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 FAM156AQ8NDB6 213 aa12.32□□□□□ -0.44
DDX41-212ENST00000511040 RBM15BQ8NDT2 890 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms