RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 MALRD1Q5VYJ5 2156 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 SCN3AQ9NY46 2000 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 SMAD9O15198 467 aaKnown RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 SHOX2O60902 331 aaPredicted RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 KHDRBS3O75525 346 aaKnown RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 APOA4P06727 396 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 FERP16591 822 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 PTPN6P29350 595 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 SRP14P37108 136 aaKnown RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 CCR8P51685 355 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 SRYQ05066 204 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 LGALS3BPQ08380 585 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 TSTA3Q13630 321 aaPredicted RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 TPD52L1Q16890 204 aaPredicted RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 DEFB134Q4QY38 66 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 TCP11X2Q5H9J9 407 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 CYP20A1Q6UW02 462 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 SBSNQ6UWP8 590 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 ZNF571Q7Z3V5 609 aaPredicted RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 ASPGQ86U10 573 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 CAMKVQ8NCB2 501 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 ZNF740Q8NDX6 193 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 OR9A1PQ8NGU1 263 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 SLC13A3Q8WWT9 602 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 UCN3Q969E3 161 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 KRT12Q99456 494 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 NTMT1Q9BV86 223 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 RHBGQ9H310 441 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 ADAP2Q9NPF8 381 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 EIF2B3Q9NR50 452 aaKnown RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 CLCF1Q9UBD9 225 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 LIMA1Q9UHB6 759 aaKnown RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 ANAPC7Q9UJX3 599 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 SLC7A7Q9UM01 511 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 CHCHD2Q9Y6H1 151 aaPredicted RBP5.18□□□□□ -1.58
USP53-206ENST00000510737 IKBKGQ9Y6K9 419 aa5.18□□□□□ -1.58
USP53-206ENST00000510737 LOC100653049A0A140TA62 436 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 A0A1W2PP18 115 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 CCDC162PA2VCL2 907 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 A8MU10 97 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 HCRTR2O43614 444 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 KRT34O76011 436 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 MYBL1P10243 752 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 ALOX12P18054 663 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 PSMA3P25788 255 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 MSNP26038 577 aaKnown RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 FOXN2P32314 431 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 COILP38432 576 aaPredicted RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 STARP49675 285 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 RPS15AP62244 130 aaKnown RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 ASPHQ12797 758 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 COX10Q12887 443 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 HERC3Q15034 1050 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 NRF1Q16656 503 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 ANKRD20A4Q4UJ75 823 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 ANKRD20A2Q5SQ80 823 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 ANKRD20A1Q5TYW2 823 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 ANKRD20A3Q5VUR7 823 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 CAPN13Q6MZZ7 669 aaPredicted RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 YRDCQ86U90 279 aaKnown RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 Q8N377 158 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 CNEP1R1Q8N9A8 125 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 SNX31Q8N9S9 440 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 KBTBD8Q8NFY9 601 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 OR10G3Q8NGC4 313 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 TRPC4APQ8TEL6 797 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 PTPMT1Q8WUK0 201 aaPredicted RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 TFB1MQ8WVM0 346 aaKnown RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 EBNA1BP2Q99848 306 aaKnown RBP5.17□□□□□ -1.58
USP53-206ENST00000510737 DOHHQ9BU89 302 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 HAUS4Q9H6D7 363 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 HOMER3Q9NSC5 361 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 TAS2R10Q9NYW0 307 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 CNIH4Q9P003 139 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 FETUBQ9UGM5 382 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 RSPH14Q9UHP6 348 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
USP53-206ENST00000510737 ALPK2Q86TB3 2170 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 GOLGA6L4A6NEF3 574 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 TRIM77I1YAP6 450 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 CLOCKO15516 846 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 CCNDBP1O95273 360 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 IPO7O95373 1038 aaKnown RBP5.16□□□□□ -1.58
USP53-206ENST00000510737 SLC16A8O95907 504 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 ACTL6AO96019 429 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 CRHP06850 196 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 KRTAP1-4P0C5Y4 121 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 CCDC172P0C7W6 258 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 ZSCAN5DPP0CG00 497 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 SMIM10L1P0DMW3 83 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 HNRNPFP52597 415 aaKnown RBP5.16□□□□□ -1.58
USP53-206ENST00000510737 GEMP55040 296 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 DYNLT1P63172 113 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 FUT7Q11130 342 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 GGTLC2Q14390 218 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 ARHGAP19Q14CB8 494 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 NCMAPQ5T1S8 102 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 CORO6Q6QEF8 472 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 STAC2Q6ZMT1 411 aa5.16□□□□□ -1.58
USP53-206ENST00000510737 GPRIN3Q6ZVF9 776 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms