RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TSPO2Q5TGU0 170 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 HACD2Q6Y1H2 254 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 DEF8Q6ZN54 512 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 TSEN54Q7Z6J9 526 aaKnown RBP11.97□□□□□ -0.49
SNF8-206ENST00000509989 NKAIN4Q8IVV8 208 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 ZNF100Q8IYN0 542 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 LRRC17Q8N6Y2 441 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 MFSD8Q8NHS3 518 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 ZNF417Q8TAU3 575 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 ADAMTS16Q8TE57 1224 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 SLC47A1Q96FL8 570 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 ZNF587Q96SQ5 575 aaPredicted RBP11.97□□□□□ -0.49
SNF8-206ENST00000509989 NAA11Q9BSU3 229 aaPredicted RBP11.97□□□□□ -0.49
SNF8-206ENST00000509989 TAPBPLQ9BX59 468 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 NSRP1Q9H0G5 558 aaKnown RBP11.97□□□□□ -0.49
SNF8-206ENST00000509989 EFCAB1Q9HAE3 211 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 NDRG3Q9UGV2 375 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 SLC13A4Q9UKG4 626 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 SLC7A7Q9UM01 511 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 ARL2BPQ9Y2Y0 163 aa11.97□□□□□ -0.49
SNF8-206ENST00000509989 J3KTA2 159 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 CXCR6O00574 342 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 KPNA4O00629 521 aaPredicted RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 EIF1BO60739 113 aaKnown RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 FKBP2P26885 142 aaKnown RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 YAP1P46937 504 aaKnown RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 MAP2K6P52564 334 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 NCALDP61601 193 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 SLC25A3Q00325 362 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 FAPQ12884 760 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 PIN1Q13526 163 aaPredicted RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 INTS11Q5TA45 600 aaKnown RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 FBXW9Q5XUX1 488 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 FAM91A1Q658Y4 838 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 ERICH5Q6P6B1 374 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 CASP12Q6UXS9 341 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 NHLRC1Q6VVB1 395 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 Q6ZT83 130 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 CREB3L2Q70SY1 520 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 BHLHA15Q7RTS1 189 aaPredicted RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 STK32CQ86UX6 486 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 RANBP3LQ86VV4 465 aaPredicted RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 MEX3DQ86XN8 651 aaKnown RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 SLC30A8Q8IWU4 369 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 FITM2Q8N6M3 262 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 ZNF433Q8N7K0 673 aaPredicted RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 FAM86B1Q8N7N1 296 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 DNAJA4Q8WW22 397 aaPredicted RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 APH1AQ96BI3 265 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 TPD52L3Q96J77 140 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 C12orf10Q9HB07 376 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 MEPEQ9NQ76 525 aaPredicted RBP11.96□□□□□ -0.49
SNF8-206ENST00000509989 MRGBPQ9NV56 204 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 ABCD2Q9UBJ2 740 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 EGFL7Q9UHF1 273 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 PLEKHA6Q9Y2H5 1048 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 GPR52Q9Y2T5 361 aa11.96□□□□□ -0.49
SNF8-206ENST00000509989 CELSR1Q9NYQ6 3014 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 TRAV36DV7A0A075B6V5 113 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.95□□□□□ -0.5
SNF8-206ENST00000509989 PDLIM1O00151 329 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 PIP5K1CO60331 668 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 FMO6PO60774 539 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 MRPL33O75394 65 aaKnown RBP11.95□□□□□ -0.5
SNF8-206ENST00000509989 RAD51DO75771 328 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 COX5AP20674 150 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 PRDX6P30041 224 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 PEX19P40855 299 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 IST1P53990 364 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 UGT2B15P54855 530 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 ITGADQ13349 1161 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 PHYHD1Q5SRE7 291 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 TMEM225Q6GV28 225 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 ZNF613Q6PF04 617 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 AAED1Q7RTV5 226 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 UBE2J2Q8N2K1 259 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 BHLHE22Q8NFJ8 381 aaPredicted RBP11.95□□□□□ -0.5
SNF8-206ENST00000509989 PFN4Q8NHR9 129 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 TMEM255BQ8WV15 326 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 NEUROG1Q92886 237 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 TXNDC15Q96J42 360 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 HOPXQ9BPY8 73 aaPredicted RBP11.95□□□□□ -0.5
SNF8-206ENST00000509989 TACO1Q9BSH4 297 aaKnown RBP11.95□□□□□ -0.5
SNF8-206ENST00000509989 AMBRA1Q9C0C7 1298 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 PCDHAC1Q9H158 963 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 ALG2Q9H553 416 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 NPAP1Q9NZP6 1156 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 EMC3Q9P0I2 261 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 RHCGQ9UBD6 479 aa11.95□□□□□ -0.5
SNF8-206ENST00000509989 MAP1AP78559 2803 aaPredicted RBP11.94□□□□□ -0.5
SNF8-206ENST00000509989 TRAPPC13A5PLN9 417 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 FFAR1O14842 300 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 CASKO14936 926 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 TRAF3IP2O43734 574 aaPredicted RBP11.94□□□□□ -0.5
SNF8-206ENST00000509989 CHP2O43745 196 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 UPK3AO75631 287 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 SERPINA1P01009 418 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 FUT1P19526 365 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 CLDN17P56750 224 aa11.94□□□□□ -0.5
SNF8-206ENST00000509989 STK11Q15831 433 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms