RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SPEF2Q9C093 1822 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLIT3O75094 1523 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 ADAMTS7Q9UKP4 1686 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 NOTCH3Q9UM47 2321 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 LOC105369274A0A096LPK9 316 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 LOC102723532A0A0G2JNH3 316 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 A0A1B0GTI1 187 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 hCG_38984A0A1B0GV85 526 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 HYKKA2RU49 373 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 GJE1A6NN92 205 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 DIRC3C9JPN6 131 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 G3V3Y1 287 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TSTD3H0UI37 97 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SLC28A1O00337 649 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 EEF2KO00418 725 aaKnown RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 AZIN1O14977 448 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ZBTB5O15062 677 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SIGLEC5O15389 551 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 NBR2O15453 112 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 MAGEB4O15481 346 aaPredicted RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 PMPCBO75439 489 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SCO1O75880 301 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 OR2J2O76002 312 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 RGS11O94810 467 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SUPT7LO94864 414 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 GLSO94925 669 aaPredicted RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ETHE1O95571 254 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 LATS1O95835 1130 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TSPAN13O95857 204 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 VIPP01282 170 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 AMY2AP04746 511 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 PRKCGP05129 697 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 FTH1P19P0C7X4 201 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 C1GALT1C1LP0DN25 315 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ACP5P13686 325 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SLC2A4P14672 509 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ST6GAL1P15907 406 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 NCK1P16333 377 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 HLA-GP17693 338 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 AMY2BP19961 511 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SERPINA2P20848 420 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ANOS1P23352 680 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SDC4P31431 198 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 GJC1P36383 396 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 AVPR1AP37288 418 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 AKR1C3P42330 323 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 RGRP47804 291 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CSNK1A1P48729 337 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CHN2P52757 468 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 F2RL1P55085 397 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 OR4D2P58180 307 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CD300CQ08708 224 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 BST2Q10589 180 aaKnown RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 MTM1Q13496 603 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 RUNX2Q13950 521 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 KCNJ11Q14654 390 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 HLFQ16534 295 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 DUSP6Q16828 381 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TATDN3Q17R31 274 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 C6orf226Q5I0X4 101 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 PABPC1L2AQ5JQF8 200 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SPIN3Q5JUX0 258 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SYT6Q5T7P8 510 aaPredicted RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TSTD2Q5T7W7 516 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 LEMD1Q68G75 181 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF774Q6NX45 483 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 GPRIN1Q7Z2K8 1008 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CLEC14AQ86T13 490 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 FAM90A1Q86YD7 464 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TRAPPC5Q8IUR0 188 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ZBTB8OSQ8IWT0 167 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 OR4N4Q8N0Y3 316 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 PELI3Q8N2H9 469 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CADM2Q8N3J6 435 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CPXM2Q8N436 756 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 OR9A4Q8NGU2 314 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 OR13D1Q8NGV5 346 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SPATA22Q8NHS9 363 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ZFP28Q8NHY6 868 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 WIPF2Q8TF74 440 aaPredicted RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 PIH1D2Q8WWB5 315 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM234Q8WY98 164 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TM9SF4Q92544 642 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 RAD54LQ92698 747 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 NAT6Q93015 286 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SLC25A28Q96A46 364 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SFRP2Q96HF1 295 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CAPZA3Q96KX2 299 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CLSTN3Q9BQT9 956 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 LMF2Q9BU23 707 aaKnown RBP4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ULBP2Q9BZM5 246 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 EPHX3Q9H6B9 360 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 CPNE5Q9HCH3 593 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 KCNK9Q9NPC2 374 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 ACOXLQ9NUZ1 547 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 SMOXQ9NWM0 555 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 DDIT4Q9NX09 232 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 NPAP1Q9NZP6 1156 aa4.1□□□□□ -1.75
NIPBL-206ENST00000509429 RSL24D1Q9UHA3 163 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms