RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 HS3ST3B1Q9Y662 390 aa3.4□□□□□ -1.87
ATP2C1-213ENST00000508297 GRIN2DO15399 1336 aa3.4□□□□□ -1.87
ATP2C1-213ENST00000508297 CNTNAP1P78357 1384 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PARP4Q9UKK3 1724 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 MYOM3Q5VTT5 1437 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 VSTM2BA6NLU5 285 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 F8VZ95 297 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SMLR1H3BR10 107 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 M0R3G1 203 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RFXANKO14593 260 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SNAI2O43623 268 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PFKFB2O60825 505 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CRTAPO75718 401 aaPredicted RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PDE5AO76074 875 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CCNB2O95067 398 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CD160O95971 181 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 HPP00738 406 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PRKCGP05129 697 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RPLP0P05388 317 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 HOXB7P09629 217 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 UBTFL1P0CB47 393 aaPredicted RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PMCHP20382 165 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PSMB6P28072 239 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 GABRR2P28476 465 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CD40LGP29965 261 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CEACAM8P31997 349 aaPredicted RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 OPRD1P41143 372 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 MAP3K8P41279 467 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ZFP36L2P47974 494 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CRISP1P54107 249 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 FOXG1P55316 489 aaPredicted RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PEX3P56589 373 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RIPK4P57078 832 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 UBE2G2P60604 165 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RPS15AP62244 130 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RPL8P62917 257 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ZNF33BQ06732 778 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SERTAD2Q14140 314 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 EIF2B1Q14232 305 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RBMS2Q15434 407 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CYTH1Q15438 398 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PSG3Q16557 428 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 DUSP7Q16829 419 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 HLA-BQ31612 363 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 GTDC1Q4AE62 458 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 KLHL22Q53GT1 634 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 XKR4Q5GH76 650 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 PTRHD1Q6GMV3 140 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SLC26A9Q7LBE3 791 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ARCQ7LC44 396 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ABHD12BQ7Z5M8 362 aaPredicted RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 MRPL10Q7Z7H8 261 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ISCA2Q86U28 154 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SLC47A2Q86VL8 602 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SFR1Q86XK3 245 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CCDC65Q8IXS2 484 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 MS4A15Q8N5U1 240 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 TRAM1L1Q8N609 369 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ZNF248Q8NDW4 579 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 OR2T33Q8NG76 320 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 OR6S1Q8NH40 331 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 NUBPLQ8TB37 319 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SORCS1Q8WY21 1168 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 DDB2Q92466 427 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 TOMM40LQ969M1 308 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 GLT1D1Q96MS3 346 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 OPALINQ96PE5 141 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 CSPG4P5Q96PW8 444 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RNF2Q99496 336 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SH3GL1Q99961 368 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 MAP1LC3CQ9BXW4 147 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 UCK2Q9BZX2 261 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SEMA4CQ9C0C4 833 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 HDHD2Q9H0R4 259 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 RETNQ9HD89 108 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ESM1Q9NQ30 184 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 MEPEQ9NQ76 525 aaPredicted RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 BFARQ9NZS9 450 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 SLC17A7Q9P2U7 560 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 EIF3KQ9UBQ5 218 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 HMGXB4Q9UGU5 601 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 MRM2Q9UI43 246 aaKnown RBP3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 POU2F3Q9UKI9 436 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 ICAM5Q9UMF0 924 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 DDX19BQ9UMR2 479 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 DMRT1Q9Y5R6 373 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 NRXN1Q9ULB1 1477 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 KIF1AQ12756 1690 aa3.39□□□□□ -1.87
ATP2C1-213ENST00000508297 USP47Q96K76 1375 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 ANKRD30BQ9BXX2 1392 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 TRBV9A0A0B4J1U6 114 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 IGHV2-70DA0A0C4DH43 119 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 C1orf232A0A0U1RR37 186 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 A0A1W2PQ72 361 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 TCRBV9S1A1TA0A576 114 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 LRRIQ3A6PVS8 624 aaPredicted RBP3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 A8MUA0 341 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 TMCO5BA8MYB1 307 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 GFYI3L273 518 aa3.38□□□□□ -1.87
ATP2C1-213ENST00000508297 TOR1AO14656 332 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms