RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SETD6Q8TBK2 473 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 ZPLD1Q8TCW7 415 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 POLE4Q9NR33 117 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 CD8B2A6NJW9 211 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 SEC14L5O43304 696 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 HEXBP07686 556 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 CD8BP10966 210 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 CDKN2AP42771 156 aaKnown RBP16.05■□□□□ 0.16
SFXN1-208ENST00000507823 NRG3P56975 720 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 INSL4Q14641 139 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 TOMM34Q15785 309 aaPredicted RBP16.05■□□□□ 0.16
SFXN1-208ENST00000507823 POC5Q8NA72 575 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 RPS4Y2Q8TD47 263 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 GPR119Q8TDV5 335 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 Q96M85 177 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 ATF6BQ99941 703 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 NDEL1Q9GZM8 345 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 RNF32Q9H0A6 362 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 KLHL1Q9NR64 748 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 MOKQ9UQ07 419 aa16.05■□□□□ 0.16
SFXN1-208ENST00000507823 TRAV36DV7A0A075B6V5 113 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 TEX13CA0A0J9YWL9 993 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 FGF5P12034 268 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 SLC26A5P58743 744 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 PPP3R1P63098 170 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 E2F1Q01094 437 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 EID2Q8N6I1 236 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
SFXN1-208ENST00000507823 NPFFR2Q9Y5X5 522 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 J3QLW9 94 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 MT-ATP6P00846 226 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 GP1BBP13224 206 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 ZNF19P17023 458 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 NAGAP17050 411 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 RPL18Q07020 188 aaKnown RBP16.04■□□□□ 0.16
SFXN1-208ENST00000507823 SIGLEC14Q08ET2 396 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 GPR139Q6DWJ6 353 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 XKRXQ6PP77 449 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 TMEM205Q6UW68 189 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 SHISA6Q6ZSJ9 500 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 MS4A15Q8N5U1 240 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 RFLNBQ8N5W9 214 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 OR5J2Q8NH18 312 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 PTDSS2Q9BVG9 487 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 WDR70Q9NW82 654 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 ADAMTS9Q9P2N4 1935 aa16.04■□□□□ 0.16
SFXN1-208ENST00000507823 IGHV3-20A0A0C4DH32 117 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 BLOC1S5-TXNDC5H3BN57 136 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 PTBP1P26599 531 aaKnown RBP eCLIP16.03■□□□□ 0.16
SFXN1-208ENST00000507823 POLR2HP52434 150 aaKnown RBP16.03■□□□□ 0.16
SFXN1-208ENST00000507823 DEFA1P59665 94 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 DEFA3P59666 94 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 CTXN1P60606 82 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 CEP76Q8TAP6 659 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 ABHD4Q8TB40 342 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 HGDQ93099 445 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 SPSB2Q99619 263 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 TMEM200CA6NKL6 621 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 DVL2O14641 736 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 CXCR1P25024 350 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 FOXL2P58012 376 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 ZNF684Q5T5D7 378 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 LEG1Q6P5S2 330 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 ARL9Q6T311 187 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 METAP1DQ6UB28 335 aaPredicted RBP16.03■□□□□ 0.16
SFXN1-208ENST00000507823 GRINAQ7Z429 371 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 PPP1R3BQ86XI6 285 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 GDPD1Q8N9F7 314 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 LSM14AQ8ND56 463 aaKnown RBP16.03■□□□□ 0.16
SFXN1-208ENST00000507823 IFI44Q8TCB0 444 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 SMAP2Q8WU79 429 aaPredicted RBP16.03■□□□□ 0.16
SFXN1-208ENST00000507823 PELI1Q96FA3 418 aa16.03■□□□□ 0.16
SFXN1-208ENST00000507823 C17orf51A8MQB3 221 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 NTN3O00634 580 aaPredicted RBP16.02■□□□□ 0.16
SFXN1-208ENST00000507823 EMP2P54851 167 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 CCDC58Q4VC31 144 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 C5orf46Q6UWT4 87 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 NANOGNBQ7Z5D8 188 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 TPRA1Q86W33 373 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 CADM3Q8N126 398 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 C10orf53Q8N6V4 93 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 OR6S1Q8NH40 331 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 STK35Q8TDR2 534 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 ACOT12Q8WYK0 555 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 TMCO6Q96DC7 493 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 MRPL48Q96GC5 212 aaKnown RBP16.02■□□□□ 0.16
SFXN1-208ENST00000507823 MFRPQ9BY79 579 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 NCDNQ9UBB6 729 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 TBC1D24Q9ULP9 559 aa16.02■□□□□ 0.16
SFXN1-208ENST00000507823 HNRNPCP07910 306 aaKnown RBP eCLIP16.02■□□□□ 0.15
SFXN1-208ENST00000507823 SUMO3P55854 103 aaPredicted RBP16.02■□□□□ 0.15
SFXN1-208ENST00000507823 CAV3P56539 151 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 RIN1Q13671 783 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 CDK5R1Q15078 307 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 QPRTQ15274 297 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 MRPL14Q6P1L8 145 aaKnown RBP16.02■□□□□ 0.15
SFXN1-208ENST00000507823 ADGRG3Q86Y34 549 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 C1orf210Q8IVY1 113 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 SMIM19Q96E16 107 aa16.02■□□□□ 0.15
SFXN1-208ENST00000507823 DEPDC7Q96QD5 511 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms