RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 SLC7A8Q9UHI5 535 aa5.09□□□□□ -1.59
USP46-206ENST00000506707 MCTS1Q9ULC4 181 aaKnown RBP5.09□□□□□ -1.59
USP46-206ENST00000506707 CLEC4AQ9UMR7 237 aa5.09□□□□□ -1.59
USP46-206ENST00000506707 POMPQ9Y244 141 aa5.09□□□□□ -1.59
USP46-206ENST00000506707 ENPP4Q9Y6X5 453 aa5.09□□□□□ -1.59
USP46-206ENST00000506707 DNAJC13O75165 2243 aa5.09□□□□□ -1.59
USP46-206ENST00000506707 ZGRF1Q86YA3 2104 aa5.09□□□□□ -1.59
USP46-206ENST00000506707 HEATR5AQ86XA9 2040 aa5.09□□□□□ -1.6
USP46-206ENST00000506707 FREM3P0C091 2139 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 GTF3C1Q12789 2109 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 USP9XQ93008 2570 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 TRAV36DV7A0A075B6V5 113 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 IGKV3D-15A0A087WSY6 115 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 A0A087WUU8 490 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 A0A1W2PRQ8 180 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ZNF716A6NP11 495 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ZNF724A8MTY0 619 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 A8MXE2 369 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 LRRN3E7EW58 273 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 MS4A18H0YCH9 400 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 hCG_2039718K7EN88 272 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 EBAG9O00559 213 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 PAX4O43316 350 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 DNPH1O43598 174 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 OR2T1O43869 369 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 SS18L1O75177 396 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 AHSA1O95433 338 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 BGLAPP02818 100 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 MT-ND1P03886 318 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 GPIP06744 558 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 YES1P07947 543 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 FCGR2AP12318 317 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 PTNP21246 168 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 OPRM1P35372 400 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 HMGA2P52926 109 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 SLC16A1P53985 500 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 TAS2R41P59536 307 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 SLC35A1P78382 337 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 RASGEF1BQ0VAM2 473 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ST3GAL3Q11203 375 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 FOXD4Q12950 439 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 DGCR6Q14129 220 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 SLC17A1Q14916 467 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 TRAM2Q15035 370 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 RNPS1Q15287 305 aaKnown RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 MS4A18Q3C1V0 323 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 MTX3Q5HYI7 312 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 OTUD3Q5T2D3 398 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 EEF1A1P5Q5VTE0 462 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ABLIM2Q6H8Q1 611 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 PPP4R4Q6NUP7 873 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 VWA1Q6PCB0 445 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 TTC33Q6PID6 262 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 TBPL2Q6SJ96 375 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 PAQR6Q6TCH4 344 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 C5orf46Q6UWT4 87 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 NHLRC1Q6VVB1 395 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 CCDC121Q6ZUS5 278 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 H1FNTQ75WM6 255 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 PIWIL3Q7Z3Z3 882 aaKnown RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 NUFIP2Q7Z417 695 aaKnown RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 OFCC1Q8IZS5 231 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 KDM8Q8N371 416 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 LRRC17Q8N6Y2 441 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ZIC4Q8N9L1 334 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ZNF610Q8N9Z0 462 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 PIK3C3Q8NEB9 887 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 TMEM255BQ8WV15 326 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 CANT1Q8WVQ1 401 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 TMEM239Q8WW34 195 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 UTP4Q969X6 686 aaKnown RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 SLC25A36Q96CQ1 311 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 CCDC124Q96CT7 223 aaKnown RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 DHRS1Q96LJ7 313 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 PRRC1Q96M27 445 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 HS6ST2Q96MM7 605 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 MOGAT1Q96PD6 335 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ZNF300Q96RE9 604 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 SEPHS2Q99611 448 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 PSD2Q9BQI7 771 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 NAA11Q9BSU3 229 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 FUZQ9BT04 418 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 FNDC11Q9BVV2 318 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 SFXN3Q9BWM7 321 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 SLC19A3Q9BZV2 496 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 BCO1Q9HAY6 547 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 KLHL9Q9P2J3 617 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 KLHL13Q9P2N7 655 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 SEC14L4Q9UDX3 406 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 KLF2Q9Y5W3 355 aaPredicted RBP5.08□□□□□ -1.6
USP46-206ENST00000506707 V9GYQ6 96 aa5.08□□□□□ -1.6
USP46-206ENST00000506707 ELOA3CA0A087WX78 387 aaPredicted RBP5.07□□□□□ -1.6
USP46-206ENST00000506707 TRBV4-1A0A0J9YWV2 114 aa5.07□□□□□ -1.6
USP46-206ENST00000506707 LOC102725191A0A1B0GVB3 256 aa5.07□□□□□ -1.6
USP46-206ENST00000506707 TCRBV3S1A0A5B6 114 aa5.07□□□□□ -1.6
USP46-206ENST00000506707 A1L4Q6 167 aa5.07□□□□□ -1.6
USP46-206ENST00000506707 NKX2-6A6NCS4 301 aa5.07□□□□□ -1.6
USP46-206ENST00000506707 AQP7P3A6NL99 342 aa5.07□□□□□ -1.6
USP46-206ENST00000506707 AQP12BA6NM10 295 aa5.07□□□□□ -1.6
USP46-206ENST00000506707 C19orf84I3L1E1 186 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms