RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DPH1Q9BZG8 443 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 NOX4Q9NPH5 578 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 TMEM138Q9NPI0 162 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF629Q9UEG4 869 aaPredicted RBP14.62□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF281Q9Y2X9 895 aa14.62□□□□□ -0.07
SCLT1-208ENST00000506368 LINC01553A4QN01 128 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SOX1O00570 391 aaPredicted RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 XRCC3O43542 346 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 GATCO43716 136 aaKnown RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 PAPLNO95428 1278 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 CDK2P24941 298 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 EDNRAP25101 427 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 PSMD4P55036 377 aaKnown RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 C9orf64Q5T6V5 341 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 HES5Q5TA89 166 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 GLT8D1Q68CQ7 371 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 JMJD6Q6NYC1 403 aaPredicted RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 NUP43Q8NFH3 380 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 ZFPM2Q8WW38 1151 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 ZDHHC5Q9C0B5 715 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SPHK1Q9NYA1 384 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 COMMD9Q9P000 198 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 OR5V1Q9UGF6 321 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 FBXL21Q9UKT6 434 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SIGLEC7Q9Y286 467 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 LRRC72A6NJI9 287 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 RLN1P04808 185 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SLC6A6P31641 620 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 DUSP8Q13202 625 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 PCGF3Q3KNV8 242 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 LRRC73Q5JTD7 316 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 OR2W3Q7Z3T1 314 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 UBE3DQ7Z6J8 389 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 HMGN2P46Q86SG4 172 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SYT9Q86SS6 491 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SERPINA12Q8IW75 414 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 CHST14Q8NCH0 376 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 OR1J4Q8NGS1 313 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 OR2A12Q8NGT7 310 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 OR2L2Q8NH16 312 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SNX33Q8WV41 574 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 WDR89Q96FK6 387 aaPredicted RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 RBM18Q96H35 190 aaKnown RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 SLC25A21Q9BQT8 299 aaPredicted RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF768Q9H5H4 540 aaKnown RBP14.61□□□□□ -0.07
SCLT1-208ENST00000506368 TAC3Q9UHF0 121 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 CLEC4EQ9ULY5 219 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 EDARQ9UNE0 448 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 TNFSF18Q9UNG2 199 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 ERVK-19Q9WJR5 959 aa14.61□□□□□ -0.07
SCLT1-208ENST00000506368 TBC1D3KA0A087X1G2 549 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 A0A1W2PPK0 400 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TBC1D3BA6NDS4 549 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TBC1D3FA6NER0 549 aaPredicted RBP14.6□□□□□ -0.07
SCLT1-208ENST00000506368 FABP1P07148 127 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TIMP2P16035 220 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TSFMP43897 325 aaKnown RBP14.6□□□□□ -0.07
SCLT1-208ENST00000506368 RAB5BP61020 215 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TP53I3Q53FA7 332 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 C18orf63Q68DL7 685 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TBC1D3GQ6DHY5 549 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ZNF704Q6ZNC4 412 aaPredicted RBP14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ACOT7LQ6ZUV0 252 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TMEM150AQ86TG1 271 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 TRAPPC5Q8IUR0 188 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 SLC35F3Q8IY50 421 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 BEST3Q8N1M1 668 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ARL14EPQ8N8R7 260 aaPredicted RBP14.6□□□□□ -0.07
SCLT1-208ENST00000506368 OR4C16Q8NGL9 310 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 OR14A16Q8NHC5 309 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 THAP6Q8TBB0 222 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ADAMTS15Q8TE58 950 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 SEC11CQ9BY50 192 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 FAM117AQ9C073 453 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ANKRD10Q9NXR5 420 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 CLDND1Q9NY35 253 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 SPG21Q9NZD8 308 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 SERTAD3Q9UJW9 196 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ICAM5Q9UMF0 924 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ASF1AQ9Y294 204 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.6□□□□□ -0.07
SCLT1-208ENST00000506368 MED31Q9Y3C7 131 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 COL4A3Q01955 1670 aa14.6□□□□□ -0.07
SCLT1-208ENST00000506368 MYO7AQ13402 2215 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 TRAV14DV4A0A0A6YYC5 116 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 RFXAPO00287 272 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 DNAJB6O75190 326 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 IL9P15248 144 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SPI1P17947 270 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SDHBP21912 280 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 CFPP27918 469 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 HCCSP53701 268 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SLC7A9P82251 487 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 TNFRSF17Q02223 184 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 CRMP1Q14194 572 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 VWA2Q5GFL6 755 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 FAM209BQ5JX69 171 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SLC35D3Q5M8T2 416 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 DCAF12L2Q5VW00 463 aa14.59□□□□□ -0.07
SCLT1-208ENST00000506368 SLC6A19Q695T7 634 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms