RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ASPNQ9BXN1 380 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 ACTR6Q9GZN1 396 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 ARL8BQ9NVJ2 186 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 RPS6KA6Q9UK32 745 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 SLC7A7Q9UM01 511 aa14.79□□□□□ -0.04
SNCA-209ENST00000506244 CTAG2O75638 210 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 ZNF682O95780 498 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 IFNW1P05000 195 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 ITGADQ13349 1161 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 SPATS1Q496A3 300 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 FBXW9Q5XUX1 488 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 TTC33Q6PID6 262 aaPredicted RBP14.78□□□□□ -0.04
SNCA-209ENST00000506244 SSX8Q7RTT4 187 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 CXorf67Q86X51 503 aaPredicted RBP14.78□□□□□ -0.04
SNCA-209ENST00000506244 C10orf53Q8N6V4 93 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 SCAIQ8N9R8 606 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 TAAR8Q969N4 342 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 SLC41A3Q96GZ6 507 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 WFIKKN1Q96NZ8 548 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 POLDIP3Q9BY77 421 aaKnown RBP14.78□□□□□ -0.04
SNCA-209ENST00000506244 CLEC4MQ9H2X3 399 aaPredicted RBP14.78□□□□□ -0.04
SNCA-209ENST00000506244 RASSF1Q9NS23 344 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 MALT1Q9UDY8 824 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 ITPR2Q14571 2701 aa14.78□□□□□ -0.04
SNCA-209ENST00000506244 FAM221AA4D161 298 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 OR6C65A6NJZ3 312 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 M0R082 166 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 AKAP8O43823 692 aaKnown RBP14.77□□□□□ -0.05
SNCA-209ENST00000506244 ADAP00813 363 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 SERPINA1P01009 418 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 NQO1P15559 274 aaKnown RBP14.77□□□□□ -0.05
SNCA-209ENST00000506244 ZNF43P17038 809 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 GGT1P19440 569 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 TNFRSF1BP20333 461 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 COX5AP20674 150 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 GRPRP30550 384 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 RBM34P42696 430 aaKnown RBP14.77□□□□□ -0.05
SNCA-209ENST00000506244 P2RY4P51582 365 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 IFI44LQ53G44 452 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 SFRP5Q5T4F7 317 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 CBLL1Q75N03 491 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 H1FNTQ75WM6 255 aaPredicted RBP14.77□□□□□ -0.05
SNCA-209ENST00000506244 ABHD12BQ7Z5M8 362 aaPredicted RBP14.77□□□□□ -0.05
SNCA-209ENST00000506244 FITM2Q8N6M3 262 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 ZNF417Q8TAU3 575 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 PRRC1Q96M27 445 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 ZNF587Q96SQ5 575 aaPredicted RBP14.77□□□□□ -0.05
SNCA-209ENST00000506244 ASB6Q9NWX5 421 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 UPB1Q9UBR1 384 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 PRSS50Q9UI38 385 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 MAGEL2Q9UJ55 1249 aa14.77□□□□□ -0.05
SNCA-209ENST00000506244 SAMD4AQ9UPU9 718 aaKnown RBP14.77□□□□□ -0.05
SNCA-209ENST00000506244 HSD17B1P14061 328 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 CALB2P22676 271 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 CRYGSP22914 178 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 OR1E2P47887 323 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 IL1RL1Q01638 556 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 C1DQ13901 141 aaKnown RBP14.76□□□□□ -0.05
SNCA-209ENST00000506244 LINC00114Q6XXX2 140 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 FKBP9P1Q75LS8 142 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 BHLHA15Q7RTS1 189 aaPredicted RBP14.76□□□□□ -0.05
SNCA-209ENST00000506244 AAED1Q7RTV5 226 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 P3H2Q8IVL5 708 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 POMGNT2Q8NAT1 580 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 BCAS4Q8TDM0 211 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 HSH2DQ96JZ2 352 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 OXGR1Q96P68 337 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 ZNF426Q9BUY5 554 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 MRPL39Q9NYK5 338 aaKnown RBP14.76□□□□□ -0.05
SNCA-209ENST00000506244 GMPR2Q9P2T1 348 aaKnown RBP14.76□□□□□ -0.05
SNCA-209ENST00000506244 EDARQ9UNE0 448 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 RCE1Q9Y256 329 aa14.76□□□□□ -0.05
SNCA-209ENST00000506244 LYPD3O95274 346 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 BGLAPP02818 100 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 SLC25A3Q00325 362 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 ST3GAL3Q11203 375 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 PMS2P3Q13401 168 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 ANKRD34AQ69YU3 496 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 WDR88Q6ZMY6 472 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 CREB3L2Q70SY1 520 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.75□□□□□ -0.05
SNCA-209ENST00000506244 CYP4Z1Q86W10 505 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 DEFB107AQ8IZN7 70 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 ARHGAP24Q8N264 748 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 S100PBPQ96BU1 408 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 ZC3HAV1LQ96H79 300 aaKnown RBP14.75□□□□□ -0.05
SNCA-209ENST00000506244 NSL1Q96IY1 281 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 HS6ST2Q96MM7 605 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 ZNF385AQ96PM9 386 aaKnown RBP14.75□□□□□ -0.05
SNCA-209ENST00000506244 SLCO5A1Q9H2Y9 848 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 FKRPQ9H9S5 495 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 NGBQ9NPG2 151 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 TAS2R16Q9NYV7 291 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 EGFL7Q9UHF1 273 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 RIMS3Q9UJD0 308 aa14.75□□□□□ -0.05
SNCA-209ENST00000506244 APCP25054 2843 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 LOC102725191A0A1B0GVB3 256 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 KPNA4O00629 521 aaPredicted RBP14.74□□□□□ -0.05
SNCA-209ENST00000506244 LYZL6O75951 148 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 KRT33AO76009 404 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms