RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 PROX1Q92786 737 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 MUS81Q96NY9 551 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 TMEM204Q9BSN7 226 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 BDH2Q9BUT1 245 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 IKZF5Q9H5V7 419 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 KAT8Q9H7Z6 458 aaKnown RBP12.37□□□□□ -0.43
SNHG4-203ENST00000506188 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 CAPN7Q9Y6W3 813 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 CSMD1Q96PZ7 3565 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 MED12LQ86YW9 2145 aa12.37□□□□□ -0.43
SNHG4-203ENST00000506188 TMEM229AB2RXF0 380 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 TPST1O60507 370 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 RAMP1O60894 148 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 NPIPB7O75200 414 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 OR6A2O95222 327 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 IFNA8P32881 189 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 PCGF2P35227 344 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 UBE2NP61088 152 aaKnown RBP12.36□□□□□ -0.43
SNHG4-203ENST00000506188 GUCY1A3Q02108 690 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 KLF10Q13118 480 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 OR1Q1Q15612 314 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 VMACQ2NL98 169 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 Q5PR19 223 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 TSPO2Q5TGU0 170 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 HMBOX1Q6NT76 420 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 ZNF613Q6PF04 617 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 CREB3L2Q70SY1 520 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 RETREG3Q86VR2 466 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 SNX32Q86XE0 403 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 SMYD1Q8NB12 490 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 OR6S1Q8NH40 331 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 OR52N5Q8NH56 324 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 SMAP2Q8WU79 429 aaPredicted RBP12.36□□□□□ -0.43
SNHG4-203ENST00000506188 LRRC58Q96CX6 371 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 PERPQ96FX8 193 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 OXGR1Q96P68 337 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 MCHR1Q99705 422 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 KCNS3Q9BQ31 491 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 CCDC134Q9H6E4 229 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 FKRPQ9H9S5 495 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 OBP2BQ9NPH6 170 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 SLC7A10Q9NS82 523 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 BAG5Q9UL15 447 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 LAMP3Q9UQV4 416 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 CHST2Q9Y4C5 530 aa12.36□□□□□ -0.43
SNHG4-203ENST00000506188 A0A087WUJ7 227 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 LOC100653049A0A140TA62 436 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 SLC43A1O75387 559 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 KRT34O76011 436 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 LGI1O95970 557 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 HIST1H2ABP04908 130 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 CDH2P19022 906 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 CD247P20963 164 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 LOXP28300 417 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 MDH1P40925 334 aaKnown RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 SH3BGRP55822 239 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 FOXD4Q12950 439 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 PMS2P3Q13401 168 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 GABRA6Q16445 453 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 ZNF672Q499Z4 452 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 NANOGP8Q6NSW7 305 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 NIPAL3Q6P499 406 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 HIST3H2AQ7L7L0 130 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 PTOV1Q86YD1 416 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 UEVLDQ8IX04 471 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 HIST1H2ACQ93077 130 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 KTI12Q96EK9 354 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 ZNF317Q96PQ6 595 aaPredicted RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 GSX2Q9BZM3 304 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 NANOGQ9H9S0 305 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 SAR1AQ9NR31 198 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 CISD1Q9NZ45 108 aaKnown RBP12.35□□□□□ -0.43
SNHG4-203ENST00000506188 RCE1Q9Y256 329 aa12.35□□□□□ -0.43
SNHG4-203ENST00000506188 DPRXA6NFQ7 191 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 ZNF726A6NNF4 738 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 M0R1B8 84 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 NDUFAB1O14561 156 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 ABCD4O14678 606 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 PLAUP00749 431 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 MT-ATP6P00846 226 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 ZNF83P51522 516 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 ATP5J2P56134 94 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 CLDN17P56750 224 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 PCBP3P57721 371 aaKnown RBP12.34□□□□□ -0.43
SNHG4-203ENST00000506188 DMTNQ08495 405 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 SF3A3Q12874 501 aaKnown RBP eCLIP12.34□□□□□ -0.432e-8■■□□□ 13.7
SNHG4-203ENST00000506188 VEZF1Q14119 521 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 ETFDHQ16134 617 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 AGAP6Q5VW22 663 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
SNHG4-203ENST00000506188 ARPINQ7Z6K5 226 aa12.34□□□□□ -0.43
SNHG4-203ENST00000506188 YTHDF3Q7Z739 585 aaKnown RBP12.34□□□□□ -0.43
SNHG4-203ENST00000506188 C10orf111Q8N326 155 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms