RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RASSF1Q9NS23 344 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 PLCXD1Q9NUJ7 323 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 TAS2R5Q9NYW4 299 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 B3GAT1Q9P2W7 334 aa9.35□□□□□ -0.91
TPM3-217ENST00000504663 MGAQ8IWI9 3026 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 K7EM74 188 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 M0R082 166 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 TAF4O00268 1085 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 IMPA2O14732 288 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 ENTPD6O75354 484 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 SMNDC1O75940 238 aaKnown RBP eCLIP9.34□□□□□ -0.91
TPM3-217ENST00000504663 NDUFB2O95178 105 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 RCBTB2O95199 551 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 TXNDC12O95881 172 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 MT-ATP6P00846 226 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 CCDC159P0C7I6 412 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 RFC3P40938 356 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 EIF1P41567 113 aaKnown RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 ID4P47928 161 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 MEOX1P50221 254 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 MAP2K6P52564 334 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 SMSP52788 366 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 NUDT6P53370 316 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 GABARAPL2P60520 117 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 CDC42P60953 191 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 FOXK2Q01167 660 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 PIGFQ07326 219 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 MYBPHQ13203 477 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 SGCBQ16585 318 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 RBM48Q5RL73 367 aaKnown RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 SLC6A19Q695T7 634 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 C3orf33Q6P1S2 294 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 IGFL3Q6UXB1 125 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 TRILQ7L0X0 811 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 YRDCQ86U90 279 aaKnown RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 TMEM251Q8N6I4 163 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 EXD3Q8N9H8 876 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 BBS1Q8NFJ9 593 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 OR8J1Q8NGP2 316 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 OR5J2Q8NH18 312 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 MFSD8Q8NHS3 518 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 ZNF417Q8TAU3 575 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 ZPLD1Q8TCW7 415 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 KISS1RQ969F8 398 aaPredicted RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 RELTQ969Z4 430 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 JSRP1Q96MG2 331 aaPredicted RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 TSPAN32Q96QS1 320 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 IL4I1Q96RQ9 567 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 ZNF587Q96SQ5 575 aaPredicted RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 TAPBPLQ9BX59 468 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 YTHDF1Q9BYJ9 559 aaKnown RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 TMEM185BQ9H7F4 350 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 PTGES2Q9H7Z7 377 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 NANSQ9NR45 359 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 KLHL1Q9NR64 748 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 CMC2Q9NRP2 79 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 MRPL39Q9NYK5 338 aaKnown RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 TVP23BQ9NYZ1 205 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 DNAJC27Q9NZQ0 273 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 PSORS1C1Q9UIG5 152 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 DKKL1Q9UK85 242 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 MYRFQ9Y2G1 1151 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 RPH3AQ9Y2J0 694 aaPredicted RBP9.34□□□□□ -0.91
TPM3-217ENST00000504663 ADAM18Q9Y3Q7 739 aa9.34□□□□□ -0.91
TPM3-217ENST00000504663 CCDC182A6NF36 153 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 H0YC42 278 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 MS4A18H0YCH9 400 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 H3BML4 177 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 K7ENP7 123 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 PLPP3O14495 311 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 ARPC3O15145 178 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 RAMP1O60894 148 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 AHSA1O95433 338 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 IGHMP01871 453 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 OPN1LWP04000 364 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 TFAP2AP05549 437 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 PEPDP12955 493 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 SLC2A5P22732 501 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 NOS3P29474 1203 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 SLC6A6P31641 620 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 IDUAP35475 653 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 TPD52P55327 224 aaPredicted RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 MVKQ03426 396 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 ZP4Q12836 540 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 MS4A18Q3C1V0 323 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 ANKDD1AQ495B1 522 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 MESTQ5EB52 335 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 ZNF766Q5HY98 468 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 WIPI1Q5MNZ9 446 aaPredicted RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 INO80CQ6PI98 192 aaPredicted RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 DPY19L2P2Q6ZN68 376 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 PTCHD4Q6ZW05 846 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 NANOGNBQ7Z5D8 188 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 CDK20Q8IZL9 346 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 SCAIQ8N9R8 606 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 ADPRHL1Q8NDY3 354 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 ZNF519Q8TB69 540 aa9.33□□□□□ -0.92
TPM3-217ENST00000504663 SLC25A43Q8WUT9 341 aaPredicted RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 TRUB1Q8WWH5 349 aaKnown RBP9.33□□□□□ -0.92
TPM3-217ENST00000504663 MIB2Q96AX9 1013 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms