RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 STX16-NPEPL1H3BU86 382 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 STX16O14662 325 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 EIF1BO60739 113 aaKnown RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 UPK3AO75631 287 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 RSL1D1O76021 490 aaKnown RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 KLHL2O95198 593 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 KRT6AP02538 564 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 KRT6BP04259 564 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 C2P06681 752 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 RPS17P08708 135 aaKnown RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 MYZAPP0CAP1 466 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 UBTFL6P0CB48 400 aaPredicted RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 KRT6CP48668 564 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 SLC35A1P78382 337 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 ARF1P84077 181 aaKnown RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 ROR2Q01974 943 aaKnown RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 HFEQ30201 348 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 EXOSC6Q5RKV6 272 aaKnown RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 ANKRD26P1Q6NSI1 321 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 KLC3Q6P597 504 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 BRD3OSQ6XYD6 125 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 GPAT4Q86UL3 456 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 ZNF563Q8TA94 476 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 GPR78Q96P69 363 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 LAT2Q9GZY6 243 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 SERHL2Q9H4I8 314 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 GRHL1Q9NZI5 618 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 TRAPPC4Q9Y296 219 aa10.58□□□□□ -0.72
LSM6-204ENST00000504181 POLR3HQ9Y535 204 aaPredicted RBP10.58□□□□□ -0.72
LSM6-204ENST00000504181 TCRBV9S1A1TA0A576 114 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 AGAP5A6NIR3 686 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 TMEM229AB2RXF0 380 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 E7ESA3 106 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 NPIPB9F8W1W9 429 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 PGRMC1O00264 195 aaKnown RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 DNAJA2O60884 412 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 CLPTM1O96005 669 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 SH3BGRP55822 239 aaPredicted RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 SEC61A1P61619 476 aaKnown RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 RPS23P62266 143 aaKnown RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 LASP1Q14847 261 aaKnown RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 FXNQ16595 210 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 TRMT5Q32P41 509 aaKnown RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 SPDYAQ5MJ70 313 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 FAM205BPQ63HN1 556 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 NIPAL3Q6P499 406 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 ZCCHC12Q6PEW1 402 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 ZNF620Q6ZNG0 422 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 TMEM99Q8N816 258 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 ZNF483Q8TF39 744 aaPredicted RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 SNX33Q8WV41 574 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 PHF21AQ96BD5 680 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 TSPAN32Q96QS1 320 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 STACQ99469 402 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 PIGUQ9H490 435 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 ACSS3Q9H6R3 686 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 LZTFL1Q9NQ48 299 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 HINT3Q9NQE9 182 aaKnown RBP10.57□□□□□ -0.72
LSM6-204ENST00000504181 DUSP22Q9NRW4 184 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 DECR2Q9NUI1 292 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 KCNE3Q9Y6H6 103 aa10.57□□□□□ -0.72
LSM6-204ENST00000504181 HYDINQ4G0P3 5121 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 K7EIL1 84 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 ANKRD28O15084 1053 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 ULK1O75385 1050 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 ZNF432O94892 652 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 AKR7A3O95154 331 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 PPP1R3DO95685 299 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 HMGN2P05204 90 aaKnown RBP10.56□□□□□ -0.72
LSM6-204ENST00000504181 ZNF35P13682 527 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 HMOX2P30519 316 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 CLK1P49759 484 aaKnown RBP10.56□□□□□ -0.72
LSM6-204ENST00000504181 GALK2Q01415 458 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 DBPQ10586 325 aaPredicted RBP10.56□□□□□ -0.72
LSM6-204ENST00000504181 TSTQ16762 297 aaKnown RBP10.56□□□□□ -0.72
LSM6-204ENST00000504181 PCGF3Q3KNV8 242 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 ZNF385BQ569K4 471 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 Q6YL49 198 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 ZFP28Q8NHY6 868 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 PYROXD1Q8WU10 500 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 CCL17Q92583 94 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 NMUR2Q9GZQ4 415 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 PRDM13Q9H4Q3 707 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 SAP30LQ9HAJ7 183 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 POLR3KQ9Y2Y1 108 aaPredicted RBP10.56□□□□□ -0.72
LSM6-204ENST00000504181 DSPPQ9NZW4 1301 aa10.56□□□□□ -0.72
LSM6-204ENST00000504181 CENPVL1A0A0U1RR11 272 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 SMIM24O75264 130 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 CSTAP01040 98 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 MELTFP08582 738 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 FAM157BP0CG42 384 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 MAKP20794 623 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 EFNA1P20827 205 aaPredicted RBP10.55□□□□□ -0.72
LSM6-204ENST00000504181 CD80P33681 288 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 RYKP34925 604 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 HNRNPA0Q13151 305 aaKnown RBP10.55□□□□□ -0.72
LSM6-204ENST00000504181 GRINAQ7Z429 371 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 OR10S1Q8NGN2 331 aa10.55□□□□□ -0.72
LSM6-204ENST00000504181 METTL6Q8TCB7 284 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms