RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 OR13H1Q8NG92 308 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 RNF128Q8TEB7 428 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 NICN1Q9BSH3 213 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 PPT2Q9UMR5 302 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 TLCD2A6NGC4 264 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 GFYI3L273 518 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 ADAM23O75077 832 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 CPNE6O95741 557 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 IGHG1P01857 330 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 SLC22A6Q4U2R8 563 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 C18orf63Q68DL7 685 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 SLC48A1Q6P1K1 146 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 SHISA6Q6ZSJ9 500 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 EID2Q8N6I1 236 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 CELF2-AS1Q8N7Q2 184 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 TM9SF4Q92544 642 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 PHYHIPQ92561 330 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 HCAR1Q9BXC0 346 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 C11orf54Q9H0W9 315 aaPredicted RBP14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 KCNJ16Q9NPI9 418 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 RPH3AQ9Y2J0 694 aaPredicted RBP14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 LUMP51884 338 aaPredicted RBP14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 FAM111BQ6SJ93 734 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 MRPL21Q7Z2W9 205 aaKnown RBP14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 TXNDC15Q96J42 360 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 GLTPQ9NZD2 209 aa14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 YARS2Q9Y2Z4 477 aaKnown RBP14.98□□□□□ -0.01
HMGXB3-202ENST00000503427 GALR3O60755 368 aaPredicted RBP14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 IFNA17P01571 189 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 SERPINE2P07093 398 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 MC2RQ01718 297 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 Q499Y3 187 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 ABHD17CQ6PCB6 329 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 OR6F1Q8NGZ6 308 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 NIPAL2Q9H841 368 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 LRFN1Q9P244 771 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 COL5A3P25940 1745 aaPredicted RBP14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 A0A0D9SG52 128 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 SERINC4A6NH21 518 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 PIPP12273 146 aaPredicted RBP14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 OR1D4P47884 311 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 PSPHP78330 225 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 C5orf46Q6UWT4 87 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 RFPL4BQ6ZWI9 263 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 GDF7Q7Z4P5 450 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 LGALS14Q8TCE9 139 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 PBX4Q9BYU1 374 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 TMEM72A0PK05 275 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 KDM4EB2RXH2 506 aaPredicted RBP14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 PTBP1P26599 531 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 FOXK1P85037 733 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 POU3F1Q03052 451 aaPredicted RBP14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 SF3B4Q15427 424 aaKnown RBP eCLIP14.97□□□□□ -0.011e-6■■■■□ 22.3
HMGXB3-202ENST00000503427 B3GLCTQ6Y288 498 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 NDUFAF7Q7L592 441 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 ZFAND1Q8TCF1 268 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 CAMK2AQ9UQM7 478 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 SCRG1O75711 98 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 FUCA1P04066 466 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 CRMP1Q14194 572 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 DUSP7Q16829 419 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 TCTEX1D2Q8WW35 142 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 GABARAPL1Q9H0R8 117 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 FGF22Q9HCT0 170 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 BIN3Q9NQY0 253 aa14.97□□□□□ -0.01
HMGXB3-202ENST00000503427 URB1O60287 2271 aaKnown RBP14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 NSG1A0A0A6YYJ2 146 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 TRBV11-1A0A0K0K1C0 115 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 FAM230AA0A1W2PPH8 454 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 TMEM82A0PJX8 343 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 LIPCP11150 499 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 CX3CR1P49238 355 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 GALEQ14376 348 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 LTB4RQ15722 352 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 CCSMST1Q4G0I0 132 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 CLVS2Q5SYC1 327 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 LCN10Q6JVE6 187 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 SLCO4A1Q96BD0 722 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 CDH20Q9HBT6 801 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 MBNL1Q9NR56 388 aaKnown RBP14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 NDRG4Q9ULP0 352 aaKnown RBP14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 LOC102725191A0A1B0GVB3 256 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 SOCS6O14544 535 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 VASPP50552 380 aaPredicted RBP14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 ZNF169Q14929 603 aaPredicted RBP14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 OR1S1Q8NH92 325 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 OR1E3Q8WZA6 343 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 VSX1Q9NZR4 365 aaPredicted RBP14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 MMACHCQ9Y4U1 282 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 DPM1O60762 260 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 PPP3CBP16298 524 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 PRKACBP22694 351 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 SRYQ05066 204 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 ACTBL2Q562R1 376 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 ZNF679Q8IYX0 411 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 CLEC1AQ8NC01 280 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 ACBD4Q8NC06 268 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 UBE2FQ969M7 185 aa14.96□□□□□ -0.01
HMGXB3-202ENST00000503427 SENP5Q96HI0 755 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms