RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 HIST2H2BCQ6DN03 193 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.67□□□□□ -0.06
SCLT1-205ENST00000503401 MAMDC2Q7Z304 686 aaPredicted RBP14.67□□□□□ -0.06
SCLT1-205ENST00000503401 GPAT4Q86UL3 456 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 ZNF417Q8TAU3 575 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 PIGXQ8TBF5 258 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 TMEM239Q8WW34 195 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 LRGUKQ96M69 825 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 ZNF587Q96SQ5 575 aaPredicted RBP14.67□□□□□ -0.06
SCLT1-205ENST00000503401 LRMDAQ9H2I8 198 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 GLRX2Q9NS18 164 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 C20orf141Q9NUB4 165 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 SLC7A8Q9UHI5 535 aa14.67□□□□□ -0.06
SCLT1-205ENST00000503401 FAM32AQ9Y421 112 aaKnown RBP14.67□□□□□ -0.06
SCLT1-205ENST00000503401 AQP7P3A6NL99 342 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 CH25HO95992 272 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 CGAP01215 116 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 YES1P07947 543 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 THRBP10828 461 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 IFNA8P32881 189 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 TRAP1Q12931 704 aaKnown RBP14.66□□□□□ -0.06
SCLT1-205ENST00000503401 SNTB1Q13884 538 aaKnown RBP14.66□□□□□ -0.06
SCLT1-205ENST00000503401 MTX3Q5HYI7 312 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 CYP4Z1Q86W10 505 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 MEX3DQ86XN8 651 aaKnown RBP14.66□□□□□ -0.06
SCLT1-205ENST00000503401 OR6K3Q8NGY3 331 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 NMNAT1Q9HAN9 279 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-205ENST00000503401 BCO1Q9HAY6 547 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 NPDC1Q9NQX5 325 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-205ENST00000503401 JKAMPQ9P055 326 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 PLEKHB1Q9UF11 243 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-205ENST00000503401 POMPQ9Y244 141 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 ALPK2Q86TB3 2170 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 PKDREJQ9NTG1 2253 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 ENO4A6NNW6 628 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 STAMBPO95630 424 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 FABP3P05413 133 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 RHCEP18577 417 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 EDNRAP25101 427 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 ASCL1P50553 236 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 FLOT2Q14254 428 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 ZNF74Q16587 644 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 TMEM225Q6GV28 225 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 TBPL2Q6SJ96 375 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 LRRC17Q8N6Y2 441 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 ZNF610Q8N9Z0 462 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 OR52J3Q8NH60 311 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 IL1RAPQ9NPH3 570 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 PROCRQ9UNN8 238 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 TESMINQ9Y4I5 508 aa14.66□□□□□ -0.06
SCLT1-205ENST00000503401 KLF2Q9Y5W3 355 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-205ENST00000503401 FLNBO75369 2602 aaKnown RBP14.65□□□□□ -0.06
SCLT1-205ENST00000503401 UQCRC1P31930 480 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 NTF4P34130 210 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 RBM34P42696 430 aaKnown RBP14.65□□□□□ -0.06
SCLT1-205ENST00000503401 SLC17A1Q14916 467 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 TRAM2Q15035 370 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 ZDHHC21Q8IVQ6 265 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 PIK3C3Q8NEB9 887 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 PIP5K1AQ99755 562 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 SLC19A3Q9BZV2 496 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 PIGMQ9H3S5 423 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 CHST11Q9NPF2 352 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 MED31Q9Y3C7 131 aa14.65□□□□□ -0.06
SCLT1-205ENST00000503401 IGKV3D-15A0A087WSY6 115 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 ZNF724A8MTY0 619 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 A8MXE2 369 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 FZD7O75084 574 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 H1F0P07305 194 aaKnown RBP14.64□□□□□ -0.07
SCLT1-205ENST00000503401 UMPSP11172 480 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 NQO1P15559 274 aaKnown RBP14.64□□□□□ -0.07
SCLT1-205ENST00000503401 ITGA2P17301 1181 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 SLC16A1P53985 500 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 IL1RL1Q01638 556 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 SPIBQ01892 262 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 EXOC3L2Q2M3D2 409 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 FGD3Q5JSP0 725 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 EEF1A1P5Q5VTE0 462 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 ZNF474Q6S9Z5 364 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-205ENST00000503401 H1FNTQ75WM6 255 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-205ENST00000503401 ASRGL1Q7L266 308 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 SLC46A3Q7Z3Q1 461 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 GALNT5Q7Z7M9 940 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 SPATA24Q86W54 205 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 NRMQ8IXM6 262 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 OR9K2Q8NGE7 335 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 ZNF385AQ96PM9 386 aaKnown RBP14.64□□□□□ -0.07
SCLT1-205ENST00000503401 RBM24Q9BX46 236 aaKnown RBP14.64□□□□□ -0.07
SCLT1-205ENST00000503401 TRIM15Q9C019 465 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 GP6Q9HCN6 339 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 NANSQ9NR45 359 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 PLSCR4Q9NRQ2 329 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 GALNT8Q9NY28 637 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 EMC3Q9P0I2 261 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 NOSIPQ9Y314 301 aaKnown RBP14.64□□□□□ -0.07
SCLT1-205ENST00000503401 FLVCR1Q9Y5Y0 555 aa14.64□□□□□ -0.07
SCLT1-205ENST00000503401 A0A087WUU8 490 aa14.63□□□□□ -0.07
SCLT1-205ENST00000503401 TRBV4-1A0A0J9YWV2 114 aa14.63□□□□□ -0.07
SCLT1-205ENST00000503401 MSTNO14793 375 aa14.63□□□□□ -0.07
SCLT1-205ENST00000503401 HPRP00739 348 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms