RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RPAP1Q9BWH6 1393 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P35-201ENST00000503360 USP6P35125 1406 aa1.83□□□□□ -2.12
HMGB1P35-201ENST00000503360 LRP5LA4QPB2 252 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SMCO2A6NFE2 343 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 C12orf71A8MTZ7 269 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 G3V4G9 280 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC17A2O00624 439 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 BCKDKO14874 412 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RS1O15537 224 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RRP8O43159 456 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RAMP1O60894 148 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RAMP3O60896 148 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 NOL4O94818 638 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 DIRAS1O95057 198 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 DUSP14O95147 198 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SERPIND1P05546 499 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 HBQ1P09105 142 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 H2AFZP0C0S5 128 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF24P17028 368 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 XRCC1P18887 633 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 GSTM3P21266 225 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 TUBG1P23258 451 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 FASP25445 335 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 STOMP27105 288 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 GDF1P27539 372 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD1CP29017 333 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 HNRNPH3P31942 346 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 YWHABP31946 246 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CDH5P33151 784 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD80P33681 288 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RPL4P36578 427 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 MDH2P40926 338 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 XCR1P46094 333 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ERVPABLB-1P60509 514 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RAB10P61026 200 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 YWHAEP62258 255 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 KCNJ2P63252 427 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 TPM4P67936 248 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RGS1Q08116 209 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 RIPPLY1Q0D2K3 151 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 C1orf61Q13536 156 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 GK3PQ14409 553 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 USF2Q15853 346 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 GSG1Q2KHT4 349 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 QRICH1Q2TAL8 776 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF829Q3KNS6 432 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 TMEM52BQ4KMG9 183 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 BEX5Q5H9J7 111 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC25A25Q6KCM7 469 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CGB2Q6NT52 195 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ENPP6Q6UWR7 440 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 PAMR1Q6UXH9 720 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 C2orf66Q6UXQ4 117 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 STAC2Q6ZMT1 411 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 APTXQ7Z2E3 356 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ERI1Q8IV48 349 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 MFSD6LQ8IWD5 586 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 BPIFB2Q8N4F0 458 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 LINC00612Q8N6U2 182 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CSNK1A1LQ8N752 337 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 PQLC3Q8N755 202 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZSCAN4Q8NAM6 433 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 GATSQ8NAP1 163 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR5T3Q8NGG3 340 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR1L6Q8NGR2 347 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR13C9Q8NGT0 318 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLHC1Q8NHS4 586 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF596Q8TC21 504 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 LRRC20Q8TCA0 184 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZPLD1Q8TCW7 415 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD300LFQ8TDQ1 290 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 NRGNQ92686 78 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 C18orf25Q96B23 403 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF707Q96C28 371 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CERS2Q96G23 380 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SERAC1Q96JX3 654 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SIGLEC12Q96PQ1 595 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC6A7Q99884 636 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 KCNS3Q9BQ31 491 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 TMEM175Q9BSA9 504 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 TEKT3Q9BXF9 490 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 FBXO44Q9H4M3 255 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 ANKRD19PQ9H560 264 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 C8orf33Q9H7E9 229 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 NMRAL1Q9HBL8 299 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SPACA1Q9HBV2 294 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 TREM1Q9NP99 234 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CCNB1IP1Q9NPC3 277 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 IL26Q9NPH9 171 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 MIEF1Q9NQG6 463 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 TUBG2Q9NRH3 451 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 PNO1Q9NRX1 252 aaKnown RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 IL36GQ9NZH8 169 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 MTCH1Q9NZJ7 389 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 BFARQ9NZS9 450 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 STOX2Q9P2F5 926 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 DPM3Q9P2X0 92 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 Q9UF83 564 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD300AQ9UGN4 299 aa1.82□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC7A8Q9UHI5 535 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms