RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 UFD1Q92890 307 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 MYDGFQ969H8 173 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 SLC41A3Q96GZ6 507 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 OXGR1Q96P68 337 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 KCNA7Q96RP8 456 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 CLCC1Q96S66 551 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 MBOAT4Q96T53 435 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 HIST1H4GQ99525 98 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 SDHCQ99643 169 aaPredicted RBP1.57□□□□□ -2.16
RBM39-242ENST00000498280 RAB34Q9BZG1 259 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 ACTR6Q9GZN1 396 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 C20orf85Q9H1P6 137 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 SLC25A22Q9H936 323 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 SEC14L3Q9UDX4 400 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 MTRF1LQ9UGC7 380 aaKnown RBP1.57□□□□□ -2.16
RBM39-242ENST00000498280 ADAM28Q9UKQ2 775 aa1.57□□□□□ -2.16
RBM39-242ENST00000498280 PRG3Q9Y2Y8 225 aaPredicted RBP1.57□□□□□ -2.16
RBM39-242ENST00000498280 RPL36Q9Y3U8 105 aaKnown RBP1.57□□□□□ -2.16
RBM39-242ENST00000498280 ATP10AO60312 1499 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 GJE1A6NN92 205 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 HSD17B6O14756 317 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 NBR2O15453 112 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 RIPK2O43353 540 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 FAM189A1O60320 539 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 SURF6O75683 361 aaKnown RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 MOSP00540 346 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 INSP01308 110 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 KLK3P07288 261 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 CAPN1P07384 714 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 GIPP09681 153 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 CHTF8P0CG12 524 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 DBTP11182 482 aaKnown RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 ZNF32P17041 273 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 BTCP35070 178 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 KIR2DS4P43632 304 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 GPM6AP51674 278 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 KPNA2P52292 529 aaKnown RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 TAS2R19P59542 299 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 CDK16Q00536 496 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 ASPHQ12797 758 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 NRF1Q16656 503 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 MICBQ29980 383 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 KLHL38Q2WGJ6 581 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 MAJINQ3KP22 176 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 LRRC23Q53EV4 343 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 MARCH8Q5T0T0 291 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 CASC10Q5T4H9 136 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 CENPPQ6IPU0 288 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 Q6ZN92 141 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 FAM43BQ6ZT52 329 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 ECHDC2Q86YB7 292 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 ZNF679Q8IYX0 411 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 ZNF433Q8N7K0 673 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 ACOT4Q8N9L9 421 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 EIF1ADQ8N9N8 165 aaKnown RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 LINC01555Q8NAE3 123 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 OR10G3Q8NGC4 313 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 OR8J1Q8NGP2 316 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 FANK1Q8TC84 345 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 MAGEE2Q8TD90 523 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 UCN3Q969E3 161 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 C10orf35Q96D05 121 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 CXorf40BQ96DE9 158 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 ITCHQ96J02 903 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 SLC35E1Q96K37 410 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 RPRD1AQ96P16 312 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 COPS8Q99627 209 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 NRTNQ99748 197 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 CCT7Q99832 543 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 P2RY13Q9BPV8 354 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 RASL11BQ9BPW5 248 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 PARD6BQ9BYG5 372 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 NHEJ1Q9H9Q4 299 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 PLGRKTQ9HBL7 147 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 MCCC2Q9HCC0 563 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 MMP26Q9NRE1 261 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 C6orf203Q9P0P8 240 aaPredicted RBP1.56□□□□□ -2.16
RBM39-242ENST00000498280 ATAD2BQ9ULI0 1458 aa1.56□□□□□ -2.16
RBM39-242ENST00000498280 LTBP1Q14766 1721 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 A0A1B0GVL5 298 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 CLRN2A0PK11 232 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 PINLYPA6NC86 204 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 LOC110117498-PIK3R3F6TDL0 507 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 FOXE1O00358 373 aaPredicted RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 AGPAT2O15120 278 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 TIMM8AO60220 97 aaPredicted RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 IGHV4-34P06331 123 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 NR2C1P13056 603 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 ICAM2P13598 275 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 RCC1P18754 421 aaPredicted RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 MDKP21741 143 aaPredicted RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 PRDX3P30048 256 aaKnown RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 NUDT1P36639 197 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 GLP1RP43220 463 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 RPS10P46783 165 aaKnown RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 CRYBB1P53674 252 aaPredicted RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 DLX1P56177 255 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 SEC61GP60059 68 aa1.55□□□□□ -2.16
RBM39-242ENST00000498280 NCBP1Q09161 790 aaKnown RBP1.55□□□□□ -2.16
RBM39-242ENST00000498280 OR5I1Q13606 314 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms