RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 STAMBPO95630 424 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 SERPINA1P01009 418 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 FPR1P21462 350 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 MSX2P35548 267 aaPredicted RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 CRYBA2P53672 197 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 TSC22D1Q15714 1073 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 GLYATQ6IB77 296 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 BHLHA15Q7RTS1 189 aaPredicted RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 COMTD1Q86VU5 262 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 RANBP3LQ86VV4 465 aaPredicted RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 GPR32P1Q8NGA4 272 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 VANGL1Q8TAA9 524 aaPredicted RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 LZICQ8WZA0 190 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 HSD17B8Q92506 261 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 SLC35B4Q969S0 331 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 TPD52L3Q96J77 140 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 CLPTM1LQ96KA5 538 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 EVA1AQ9H8M9 152 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 UBTD1Q9HAC8 227 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 NGBQ9NPG2 151 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 BEX4Q9NWD9 120 aaPredicted RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 TESQ9UGI8 421 aaKnown RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 PRSS50Q9UI38 385 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 BAG5Q9UL15 447 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 SLC9A8Q9Y2E8 581 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 ITPR3Q14573 2671 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 ZC3H12DA2A288 527 aaKnown RBP13.57□□□□□ -0.24
NUP50-219ENST00000497960 ZNF716A6NP11 495 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 MRPL33O75394 65 aaKnown RBP13.57□□□□□ -0.24
NUP50-219ENST00000497960 GPIP06744 558 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 IMPDH2P12268 514 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 PRG2P13727 222 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 CD53P19397 219 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 IDUAP35475 653 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 SLC16A1P53985 500 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 ACKR1Q16570 336 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 NRF1Q16656 503 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 DUSP7Q16829 419 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 C20orf204Q6ZNR8 217 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 CCDC103Q8IW40 242 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 UBE2J2Q8N2K1 259 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 PIGTQ969N2 578 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 APH1AQ96BI3 265 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 PLPPR2Q96GM1 343 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 NSMCE2Q96MF7 247 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 HS3ST6Q96QI5 342 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 TAPBPLQ9BX59 468 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 PCDHAC1Q9H158 963 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 MUC13Q9H3R2 512 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 RPS6KB2Q9UBS0 482 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 RPS6KA6Q9UK32 745 aa13.57□□□□□ -0.24
NUP50-219ENST00000497960 HRNRQ86YZ3 2850 aaPredicted RBP13.56□□□□□ -0.24
NUP50-219ENST00000497960 A8MVM7 634 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 LYZL6O75951 148 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 LGI1O95970 557 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 C8BP07358 591 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 LOXP28300 417 aaPredicted RBP13.56□□□□□ -0.24
NUP50-219ENST00000497960 H3F3AP84243 136 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 HOXC5Q00444 222 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 OR7A5Q15622 319 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 TAB1Q15750 504 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 FXNQ16595 210 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 FBXW9Q5XUX1 488 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.56□□□□□ -0.24
NUP50-219ENST00000497960 TGIF2LYQ8IUE0 185 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 ASB9Q96DX5 294 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 HSH2DQ96JZ2 352 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 RSPO3Q9BXY4 272 aaPredicted RBP13.56□□□□□ -0.24
NUP50-219ENST00000497960 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 PARPBPQ9NWS1 579 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 SAMD4AQ9UPU9 718 aaKnown RBP13.56□□□□□ -0.24
NUP50-219ENST00000497960 V9GYQ6 96 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 MTORP42345 2549 aa13.56□□□□□ -0.24
NUP50-219ENST00000497960 LIPT2A6NK58 231 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 RAMP1O60894 148 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 CD99P14209 185 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 TNFRSF1BP20333 461 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 EDNRAP25101 427 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 STK11Q15831 433 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 OTUD3Q5T2D3 398 aaPredicted RBP13.55□□□□□ -0.24
NUP50-219ENST00000497960 CYP2R1Q6VVX0 501 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 DEF8Q6ZN54 512 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 ZNF704Q6ZNC4 412 aaPredicted RBP13.55□□□□□ -0.24
NUP50-219ENST00000497960 FKBP9P1Q75LS8 142 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 CBLL1Q75N03 491 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 SSX8Q7RTT4 187 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 CARM1Q86X55 608 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 OR52E4Q8NGH9 312 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 C3orf49Q96BT1 292 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 MUCL1Q96DR8 90 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 CCL19Q99731 98 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 PIP5K1AQ99755 562 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 CADM1Q9BY67 442 aaKnown RBP13.55□□□□□ -0.24
NUP50-219ENST00000497960 TRIM15Q9C019 465 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 GORASP2Q9H8Y8 452 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 ACTR3BQ9P1U1 418 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 SH3GLB1Q9Y371 365 aa13.55□□□□□ -0.24
NUP50-219ENST00000497960 DSCAMO60469 2012 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms