RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 HIST2H2BDQ6DRA6 164 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 OLIG3Q7RTU3 272 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 DDIASQ8IXT1 998 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 OR2T11Q8NH01 316 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 TWIST2Q8WVJ9 160 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 C3orf30Q96M34 536 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 ZNF385AQ96PM9 386 aaKnown RBP14.2□□□□□ -0.14
VIM-208ENST00000497849 CCDC134Q9H6E4 229 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 TMEM45AQ9NWC5 275 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 C1orf109Q9NX04 203 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.2□□□□□ -0.14
VIM-208ENST00000497849 ZNF281Q9Y2X9 895 aa14.2□□□□□ -0.14
VIM-208ENST00000497849 ARPC4-TTLL3A0A0A6YYG9 625 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 TRAV20A0A0B4J274 112 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 ANKRD28O15084 1053 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 FCMRO60667 390 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 UGT2B17O75795 530 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 LGI1O95970 557 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 IGKV3-15P01624 115 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 CELA3BP08861 270 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 SAGP10523 405 aaPredicted RBP14.19□□□□□ -0.14
VIM-208ENST00000497849 COL8A2P25067 703 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 CCT3P49368 545 aaKnown RBP14.19□□□□□ -0.14
VIM-208ENST00000497849 LMO4P61968 165 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 GPR68Q15743 365 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 GRINAQ7Z429 371 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 POMGNT2Q8NAT1 580 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 FAM71CQ8NEG0 241 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 OR5D16Q8NGK9 328 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 PSMA8Q8TAA3 256 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 BCL2L2Q92843 193 aaPredicted RBP14.19□□□□□ -0.14
VIM-208ENST00000497849 AURKBQ96GD4 344 aaPredicted RBP14.19□□□□□ -0.14
VIM-208ENST00000497849 ANKRD27Q96NW4 1050 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 OR7D2Q96RA2 312 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 NELFAQ9H3P2 528 aa14.19□□□□□ -0.14
VIM-208ENST00000497849 FAF1Q9UNN5 650 aaPredicted RBP14.19□□□□□ -0.14
VIM-208ENST00000497849 EIF1BO60739 113 aaKnown RBP14.18□□□□□ -0.14
VIM-208ENST00000497849 HPXP02790 462 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 CCNA2P20248 432 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 PAX7P23759 505 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 PGM1P36871 562 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 UBE2NP61088 152 aaKnown RBP14.18□□□□□ -0.14
VIM-208ENST00000497849 SLC35A1P78382 337 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 POU3F1Q03052 451 aaPredicted RBP14.18□□□□□ -0.14
VIM-208ENST00000497849 ATP6AP1LQ52LC2 224 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 RFTN2Q52LD8 501 aaPredicted RBP14.18□□□□□ -0.14
VIM-208ENST00000497849 LINGO2Q7L985 606 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 AAED1Q7RTV5 226 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 C1QL2Q7Z5L3 287 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 OR56A1Q8NGH5 318 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 ZNF563Q8TA94 476 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 MTERF3Q96E29 417 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 THOC1Q96FV9 657 aaKnown RBP14.18□□□□□ -0.14
VIM-208ENST00000497849 TMPRSS13Q9BYE2 586 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 HAO1Q9UJM8 370 aa14.18□□□□□ -0.14
VIM-208ENST00000497849 A0A096LPE4 126 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 A0A1W2PPZ6 126 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 VSTM5A8MXK1 200 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 SLC28A1O00337 649 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 CHEK2O96017 543 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 KRT16P08779 473 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 ADRA2CP18825 462 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 FKBP2P26885 142 aaKnown RBP14.17□□□□□ -0.14
VIM-208ENST00000497849 RYKP34925 604 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 SF3A3Q12874 501 aaKnown RBP eCLIP14.17□□□□□ -0.14
VIM-208ENST00000497849 MAPK14Q16539 360 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 MSMPQ1L6U9 139 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 EIF3MQ7L2H7 374 aaKnown RBP14.17□□□□□ -0.14
VIM-208ENST00000497849 TEX29Q8N6K0 151 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 FAM169BQ8N8A8 192 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 OR7A2PQ8NGA2 310 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 NAA11Q9BSU3 229 aaPredicted RBP14.17□□□□□ -0.14
VIM-208ENST00000497849 NUF2Q9BZD4 464 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 SERHL2Q9H4I8 314 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 ATP6V1HQ9UI12 483 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 MKLN1Q9UL63 735 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 PPIAL4AQ9Y536 164 aa14.17□□□□□ -0.14
VIM-208ENST00000497849 NBEAL2Q6ZNJ1 2754 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 IGHV2OR16-5A0A0B4J2B6 119 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 GMNCA6NCL1 334 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 OR6C65A6NJZ3 312 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 PEX11AO75192 247 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 BCL10O95999 233 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 VIMP08670 466 aaKnown RBP14.16□□□□□ -0.14
VIM-208ENST00000497849 LAMP1P11279 417 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 ACHEP22303 614 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 ZFP36P26651 326 aaKnown RBP14.16□□□□□ -0.14
VIM-208ENST00000497849 RPS26P62854 115 aaKnown RBP14.16□□□□□ -0.14
VIM-208ENST00000497849 RPL38P63173 70 aaKnown RBP14.16□□□□□ -0.14
VIM-208ENST00000497849 PLAURQ03405 335 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 GALNTL6Q49A17 601 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 SLC9B1Q4ZJI4 515 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 PAQR6Q6TCH4 344 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 MAVSQ7Z434 540 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 ABHD12BQ7Z5M8 362 aaPredicted RBP14.16□□□□□ -0.14
VIM-208ENST00000497849 OR9K2Q8NGE7 335 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 MAGEE2Q8TD90 523 aaPredicted RBP14.16□□□□□ -0.14
VIM-208ENST00000497849 YIPF5Q969M3 257 aa14.16□□□□□ -0.14
VIM-208ENST00000497849 ALKBH3Q96Q83 286 aaPredicted RBP14.16□□□□□ -0.14
VIM-208ENST00000497849 UNKLQ9H9P5 680 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms