RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TDRD15B5MCY1 1934 aaKnown RBP12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 CTDSPLO15194 276 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 CD70P32970 193 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 DHRS7BQ6IAN0 325 aaPredicted RBP12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 MRM1Q6IN84 353 aaKnown RBP12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 Q6ZVU0 165 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 OR6K6Q8NGW6 343 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 OR4C6Q8NH72 309 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 STOML3Q8TAV4 291 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 ELP5Q8TE02 316 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 ARL11Q969Q4 196 aa12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 FARSAQ9Y285 508 aaKnown RBP12.04□□□□□ -0.48
GAPVD1-220ENST00000497580 ZNF879B4DU55 563 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 EEF1E1-BLOC1S5C9J1V9 151 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 H7BY64 318 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SOCS5O75159 536 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 NTSP30990 170 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SLC11A1P49279 550 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 OR2B8PP59922 312 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 ST8SIA6P61647 398 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SNRPD1P62314 119 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 TDGQ13569 410 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 GLB1L2Q8IW92 636 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 CASTOR1Q8WTX7 329 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 ISOC2Q96AB3 205 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 VOPP1Q96AW1 172 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 PELI1Q96FA3 418 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 PRAP1Q96NZ9 151 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 KCNK15Q9H427 330 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 TCF7L1Q9HCS4 588 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 MED17Q9NVC6 651 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 OR5V1Q9UGF6 321 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 A0A0D9SG52 128 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 CPT2P23786 658 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 FOXK2Q01167 660 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 DEFA6Q01524 100 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 PRAMEF14Q5SWL7 426 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SDR9C7Q8NEX9 313 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 OR4K13Q8NH42 304 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 RHOVQ96L33 236 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 CAPN10Q9HC96 672 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 ATXN7L1Q9ULK2 861 aaPredicted RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 ICKQ9UPZ9 632 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 V9GY05 133 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 TRPM7Q96QT4 1865 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 TRAV18A0A075B6X5 111 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 A0A0B4J2A0 478 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 A0A1B0GV90 55 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 M0QYG6 137 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SNAPC5O75971 98 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 C1orf105O95561 183 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 CD3DP04234 171 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 PSMB5P28074 263 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 AGTR1P30556 359 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SDHAP31040 664 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 PSMD4P55036 377 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 OR2B11Q5JQS5 317 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 NCMAPQ5T1S8 102 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 KHDRBS2Q5VWX1 349 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 ZNF425Q6IV72 752 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 JMJD6Q6NYC1 403 aaPredicted RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 ARMC10Q8N2F6 343 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 GRHL3Q8TE85 626 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 KISS1RQ969F8 398 aaPredicted RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 PLD4Q96BZ4 506 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 C1QTNF2Q9BXJ5 285 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 GAREM1Q9H706 876 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 ADGRL4Q9HBW9 690 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SIDT1Q9NXL6 827 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 SHPKQ9UHJ6 478 aa12.03□□□□□ -0.48
GAPVD1-220ENST00000497580 IGLV3-16A0A075B6K0 115 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 MAKP20794 623 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 PNLIPRP2P54317 469 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 SREBF2Q12772 1141 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 LMAN2Q12907 356 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 CDK5R1Q15078 307 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 MICBQ29980 383 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 KLHL26Q53HC5 615 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 KCTD9Q7L273 389 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 FAM219AQ8IW50 185 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 INO80EQ8NBZ0 244 aaPredicted RBP12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 OR1J4Q8NGS1 313 aa12.02□□□□□ -0.48
GAPVD1-220ENST00000497580 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 KIAA0355O15063 1070 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 NPC1O15118 1278 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 OIP5O43482 229 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 BCL2L11O43521 198 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 OR1F1O43749 312 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 VNN2O95498 520 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 DDX6P26196 483 aaKnown RBP eCLIP12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 ATP1B3P54709 279 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 SIRPAP78324 504 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 OLFML2AQ68BL7 652 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 MBOAT2Q6ZWT7 520 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 SLC36A1Q7Z2H8 476 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 HSPA12BQ96MM6 686 aa12.02□□□□□ -0.49
GAPVD1-220ENST00000497580 CLCC1Q96S66 551 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms