RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 MTRF1O75570 445 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 TCEA1P23193 301 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 RPL27P61353 136 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 MLLT11Q13015 90 aaPredicted RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 ZAR1Q86SH2 424 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 MS4A15Q8N5U1 240 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 PHF21AQ96BD5 680 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ACOT13Q9NPJ3 140 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ZNF226Q9NYT6 803 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 CKLFQ9UBR5 152 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ZNF879B4DU55 563 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SNPHO15079 494 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 PRKYO43930 277 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 HTR1AP08908 422 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 PTNP21246 168 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 CNR1P21554 472 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 AQP2P41181 271 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 CHAF1BQ13112 559 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 NDUFAF6Q330K2 333 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ZNF770Q6IQ21 691 aaPredicted RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 ABHD12BQ7Z5M8 362 aaPredicted RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 SIRT6Q8N6T7 355 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 OR10G3Q8NGC4 313 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 OR52N1Q8NH53 320 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ISOC1Q96CN7 298 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SNX18Q96RF0 628 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 DCUN1D5Q9BTE7 237 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ALG12Q9BV10 488 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 MAN2C1Q9NTJ4 1040 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 MRPL39Q9NYK5 338 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 REV1Q9UBZ9 1251 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 HEATR5BQ9P2D3 2071 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 TMEM129A0AVI4 362 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 ARGFXA6NJG6 315 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 H3BML4 177 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 DNPH1O43598 174 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 HYAL3O43820 417 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 FARS2O95363 451 aaKnown RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 OR2T7P0C7T2 308 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 SMIM18P0DKX4 95 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 ETV5P41161 510 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 CRYBA2P53672 197 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 ATP1A4Q13733 1029 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 CD226Q15762 336 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 SYT14P1Q58G82 188 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 UBE2UQ5VVX9 321 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 KRT77Q7Z794 578 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 OR2T27Q8NH04 317 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 SLC22A11Q9NSA0 550 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 FLRT3Q9NZU0 649 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 STUB1Q9UNE7 303 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 GPR52Q9Y2T5 361 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 PEX16Q9Y5Y5 336 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 GPR171O14626 319 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 GLCEO94923 617 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 PLGP00747 810 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 CD2P06729 351 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 CTU2Q2VPK5 515 aaKnown RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 TMEM176BQ3YBM2 270 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 SMUG1Q53HV7 270 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 TMEM81Q6P7N7 255 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 GPAT4Q86UL3 456 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 YIPF7Q8N8F6 280 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 APCDD1LQ8NCL9 501 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 SDR9C7Q8NEX9 313 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 OR6N2Q8NGY6 317 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 ANGPTL4Q9BY76 406 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 FGF20Q9NP95 211 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 RPH3AQ9Y2J0 694 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 CROCCQ5TZA2 2017 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 TEX13CA0A0J9YWL9 993 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 MAKP20794 623 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 ENPP1P22413 925 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 MAP2K4P45985 399 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 SLC25A1P53007 311 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 EMX1Q04741 257 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 FOXF1Q12946 379 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 DCAF10Q5QP82 559 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 SYT6Q5T7P8 510 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 RNLSQ5VYX0 342 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 SLC25A25Q6KCM7 469 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 TMEM53Q6P2H8 277 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 Q6ZPB1 254 aaPredicted RBP7.61□□□□□ -1.19
USP54-215ENST00000497106 SIMC1Q8NDZ2 872 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 HGDQ93099 445 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 INTS14Q96SY0 518 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 TXNIPQ9H3M7 391 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 PARPBPQ9NWS1 579 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 FKBP7Q9Y680 259 aa7.61□□□□□ -1.19
USP54-215ENST00000497106 OR6C65A6NJZ3 312 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 EDNRAP25101 427 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SFTPDP35247 375 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 CASP3P42574 277 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SLC15A1P46059 708 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 BDH1Q02338 343 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 CRTC2Q53ET0 693 aaPredicted RBP7.6□□□□□ -1.19
USP54-215ENST00000497106 SPANXN2Q5MJ10 180 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 TIGD3Q6B0B8 471 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 PPP1R32Q7Z5V6 425 aa7.6□□□□□ -1.19
USP54-215ENST00000497106 SLC37A3Q8NCC5 494 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms