RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	SLC9A3	P48764	834 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	OR2B6	P58173	313 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	RAC3	P60763	192 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	RPS3A	P61247	264 aa	Known RBP	12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CSNK2A1	P68400	391 aa	Predicted RBP	12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	FHL1	Q13642	323 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	MFSD13A	Q14CX5	517 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TAF11	Q15544	211 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PDSS1	Q5T2R2	415 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	KDM4D	Q6B0I6	523 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CD300LD	Q6UXZ3	194 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	MAMDC2	Q7Z304	686 aa	Predicted RBP	12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CPT1C	Q8TCG5	803 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	OSTF1	Q92882	214 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TOR3A	Q9H497	397 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	SEC14L4	Q9UDX3	406 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TMEFF2	Q9UIK5	374 aa	Predicted RBP	12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852	POFUT2	Q9Y2G5	429 aa		12.51	□□□□□ -0.41
ATPAF2-208	ENST00000496852		H3BN98	237 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	BCKDK	O14874	412 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TP53	P04637	393 aa	Predicted RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TSPAN19	P0C672	248 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PTGS2	P35354	604 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	EIF1AX	P47813	144 aa	Known RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CARD18	P57730	90 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	RPS4X	P62701	263 aa	Known RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	SLC35A1	P78382	337 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	H3F3A	P84243	136 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZNF239	Q16600	458 aa	Known RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	RFX4	Q33E94	735 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	WLS	Q5T9L3	541 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	KLHL17	Q6TDP4	642 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PM20D2	Q8IYS1	436 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	DHRSX	Q8N5I4	330 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	OR13C2	Q8NGS9	318 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CPNE4	Q96A23	557 aa	Predicted RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZNF845	Q96IR2	970 aa	Predicted RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852		Q9H521	79 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PAQR5	Q9NXK6	330 aa	Predicted RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	MRPL39	Q9NYK5	338 aa	Known RBP	12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CAMK2A	Q9UQM7	478 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	SIGLEC7	Q9Y286	467 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CORIN	Q9Y5Q5	1042 aa		12.5	□□□□□ -0.41
ATPAF2-208	ENST00000496852	UNC119B	A6NIH7	251 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZNF814	B7Z6K7	855 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852		M0R082	166 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PTP4A3	O75365	173 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	AKR7A3	O95154	331 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	KLK2	P20151	261 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	GSTM3	P21266	225 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	P2RY4	P51582	365 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	AGFG1	P52594	562 aa	Known RBP	12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	NUP107	P57740	925 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	COX10	Q12887	443 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	SGCB	Q16585	318 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	GXYLT1	Q4G148	440 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	EMC4	Q5J8M3	183 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PAQR6	Q6TCH4	344 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	GFRAL	Q6UXV0	394 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ADGRE4P	Q86SQ3	457 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	OAF	Q86UD1	273 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TMEM99	Q8N816	258 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	SCAI	Q8N9R8	606 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	OR5J2	Q8NH18	312 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZNF417	Q8TAU3	575 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZPLD1	Q8TCW7	415 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TUBA1C	Q9BQE3	449 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ADI1	Q9BV57	179 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ASPN	Q9BXN1	380 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PNPLA3	Q9NST1	481 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	REV1	Q9UBZ9	1251 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	HIF3A	Q9Y2N7	669 aa		12.49	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TRAV27	A0A087WT01	109 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852		H0YJX3	145 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	SMAD9	O15198	467 aa	Known RBP	12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	EIF1B	O60739	113 aa	Known RBP	12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	SOX14	O95416	240 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	GTF2E2	P29084	291 aa	Known RBP	12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	UQCRC1	P31930	480 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	POLR2I	P36954	125 aa	Known RBP	12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	FXYD6P3	P58550	94 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ANKDD1A	Q495B1	522 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZBED5	Q49AG3	693 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	RASSF6	Q6ZTQ3	369 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	H1FNT	Q75WM6	255 aa	Predicted RBP	12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	NANOGNB	Q7Z5D8	188 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	KIF18B	Q86Y91	864 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	PARP8	Q8N3A8	854 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ADPRHL1	Q8NDY3	354 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	OR5M9	Q8NGP3	310 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	OR51A7	Q8NH64	312 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	FAM57A	Q8TBR7	257 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TNFRSF13C	Q96RJ3	184 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	MCCC2	Q9HCC0	563 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	CHST11	Q9NPF2	352 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	TIGAR	Q9NQ88	270 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	B3GALT5	Q9Y2C3	310 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ZNF835	Q9Y2P0	537 aa		12.48	□□□□□ -0.41
ATPAF2-208	ENST00000496852	ALPK2	Q86TB3	2170 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms