RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PGBD2Q6P3X8 592 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 B3GNT6Q6ZMB0 384 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 H1FNTQ75WM6 255 aaPredicted RBP19.46■□□□□ 0.71
C9orf3-222ENST00000496567 FCRLAQ7L513 359 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 P4HA3Q7Z4N8 544 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 GTF2IRD2Q86UP8 949 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 SLC43A2Q8N370 569 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 OR9Q2Q8NGE9 314 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 OR5J2Q8NH18 312 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 FNDC9Q8TBE3 224 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 GNPDA2Q8TDQ7 276 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 WNT2BQ93097 391 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 PSD2Q9BQI7 771 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 CHST11Q9NPF2 352 aa19.46■□□□□ 0.71
C9orf3-222ENST00000496567 AQP7P3A6NL99 342 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 G3V2T6 193 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 M0R082 166 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 SMAD9O15198 467 aaKnown RBP19.45■□□□□ 0.7
C9orf3-222ENST00000496567 CA7P43166 264 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 GPR4P46093 362 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 ZNF770Q6IQ21 691 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-222ENST00000496567 RPTNQ6XPR3 784 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 TMEM99Q8N816 258 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 AQP11Q8NBQ7 271 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 ICA1LQ8NDH6 482 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 ADPRHL1Q8NDY3 354 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 ZNF417Q8TAU3 575 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 ROBO4Q8WZ75 1007 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 SDCCAG3Q96C92 435 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 ZNF587Q96SQ5 575 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-222ENST00000496567 SH3BGRL2Q9UJC5 107 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 MGAT4BQ9UQ53 548 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 FAM215AQ9Y5M1 114 aa19.45■□□□□ 0.7
C9orf3-222ENST00000496567 IGHV3-15A0A0B4J1V0 119 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 VAMP5O95183 116 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 ANPEPP15144 967 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 FPR3P25089 353 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 PMS2P3Q13401 168 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 ANKDD1AQ495B1 522 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 TMEM225Q6GV28 225 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 RTL6Q6ICC9 239 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 NANOGNBQ7Z5D8 188 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 OAFQ86UD1 273 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 LRRC17Q8N6Y2 441 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 RNF128Q8TEB7 428 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 TM9SF2Q99805 663 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 E9PLN8 166 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 CYTIPO60759 359 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 OR6A2O95222 327 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 TGM6O95932 706 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 GASTP01350 101 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 ANXA8P13928 327 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 TSPAN31Q12999 210 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 RNPS1Q15287 305 aaKnown RBP19.44■□□□□ 0.7
C9orf3-222ENST00000496567 TAF11Q15544 211 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 C3P1Q6ZMU1 363 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 MEX3DQ86XN8 651 aaKnown RBP19.44■□□□□ 0.7
C9orf3-222ENST00000496567 MCEMP1Q8IX19 187 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 FEVQ99581 238 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 VKORC1Q9BQB6 163 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 DGCR6LQ9BY27 220 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 STX18Q9P2W9 335 aaKnown RBP19.44■□□□□ 0.7
C9orf3-222ENST00000496567 OAZ3Q9UMX2 235 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 RASD1Q9Y272 281 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 KIAA1549Q9HCM3 1950 aa19.44■□□□□ 0.7
C9orf3-222ENST00000496567 RP1L1Q8IWN7 2480 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-222ENST00000496567 MBD3L4A6NDZ8 208 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-222ENST00000496567 MBD3L3A6NE82 208 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-222ENST00000496567 MBD3L5A6NJ08 208 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-222ENST00000496567 CDC42EP2O14613 210 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 KLF4O43474 513 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 AQP8O94778 261 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 ADAP00813 363 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 GNLYP22749 145 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 TIMP3P35625 211 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 GSSP48637 474 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 ABLIM2Q6H8Q1 611 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 TMEM211Q6ICI0 200 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 OR2A2Q6IF42 318 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 CCDC103Q8IW40 242 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 HS3ST5Q8IZT8 346 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 MBD3L2Q8NHZ7 208 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-222ENST00000496567 TTYH2Q9BSA4 534 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 RNF122Q9H9V4 155 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 ZNF556Q9HAH1 456 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 KLHL9Q9P2J3 617 aa19.43■□□□□ 0.7
C9orf3-222ENST00000496567 UNC119BA6NIH7 251 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 KDM4EB2RXH2 506 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-222ENST00000496567 ZNF814B7Z6K7 855 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 BLOC1S5-TXNDC5H3BN57 136 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 PLPP3O14495 311 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 ADORA3P0DMS8 318 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 GSTM3P21266 225 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 PRKACGP22612 351 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 P2RY4P51582 365 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 PUDPQ08623 228 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 RASGEF1BQ0VAM2 473 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 ZBED5Q49AG3 693 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 PLXDC2Q6UX71 529 aa19.42■□□□□ 0.7
C9orf3-222ENST00000496567 STK32CQ86UX6 486 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms