RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 TAS2R41P59536 307 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 H3F3AP84243 136 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 IL1RL1Q01638 556 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 ITGADQ13349 1161 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 FXNQ16595 210 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 IFI44LQ53G44 452 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 ENTPD8Q5MY95 495 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 FAM69AQ5T7M9 428 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 Q6ZT83 130 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 CXorf67Q86X51 503 aaPredicted RBP14.53□□□□□ -0.08
SF3A1-209ENST00000496189 C10orf53Q8N6V4 93 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 FAM156AQ8NDB6 213 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 GEMIN6Q8WXD5 167 aaKnown RBP14.53□□□□□ -0.08
SF3A1-209ENST00000496189 ZC3HAV1LQ96H79 300 aaKnown RBP14.53□□□□□ -0.08
SF3A1-209ENST00000496189 NSMCE2Q96MF7 247 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 WFIKKN1Q96NZ8 548 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 PRR14Q9BWN1 585 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 ACTR6Q9GZN1 396 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 NGBQ9NPG2 151 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 UPB1Q9UBR1 384 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 RASD1Q9Y272 281 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 NAV2Q8IVL1 2488 aa14.52□□□□□ -0.08
SF3A1-209ENST00000496189 CHP2O43745 196 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 NPIPB7O75200 414 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 ADAP00813 363 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 OR1E2P47887 323 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 BNIP1Q12981 228 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 SFRP5Q5T4F7 317 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 ANKRD34AQ69YU3 496 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 DEF8Q6ZN54 512 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 CDH24Q86UP0 819 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 TMEM99Q8N816 258 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 ADAMTS16Q8TE57 1224 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 POP5Q969H6 163 aaKnown RBP14.52□□□□□ -0.09
SF3A1-209ENST00000496189 MPP4Q96JB8 637 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 WFDC6Q9BQY6 131 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 BTBD10Q9BSF8 475 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 ASPNQ9BXN1 380 aa14.52□□□□□ -0.09
SF3A1-209ENST00000496189 DCAF13Q9NV06 445 aaKnown RBP14.52□□□□□ -0.09
SF3A1-209ENST00000496189 ING1Q9UK53 422 aaPredicted RBP14.52□□□□□ -0.09
SF3A1-209ENST00000496189 ITPR2Q14571 2701 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 A0A087WUJ7 227 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 ARPC2O15144 300 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 TPST2O60704 377 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 KRT33AO76009 404 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 NQO1P15559 274 aaKnown RBP14.51□□□□□ -0.09
SF3A1-209ENST00000496189 KLK2P20151 261 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 MSX2P35548 267 aaPredicted RBP14.51□□□□□ -0.09
SF3A1-209ENST00000496189 CDH12P55289 794 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 CBX1P83916 185 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 SLC17A1Q14916 467 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 NPTX1Q15818 432 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 MTX3Q5HYI7 312 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 FBXW9Q5XUX1 488 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 TTC33Q6PID6 262 aaPredicted RBP14.51□□□□□ -0.09
SF3A1-209ENST00000496189 SSX8Q7RTT4 187 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 ABHD12BQ7Z5M8 362 aaPredicted RBP14.51□□□□□ -0.09
SF3A1-209ENST00000496189 CYP4Z1Q86W10 505 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 RBM45Q8IUH3 476 aaKnown RBP14.51□□□□□ -0.09
SF3A1-209ENST00000496189 GABRG1Q8N1C3 465 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 OR4D11Q8NGI4 311 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 OR6S1Q8NH40 331 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 KTI12Q96EK9 354 aaPredicted RBP14.51□□□□□ -0.09
SF3A1-209ENST00000496189 HSH2DQ96JZ2 352 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 TMEM43Q9BTV4 400 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 THTPAQ9BU02 230 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 ASB6Q9NWX5 421 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 CORINQ9Y5Q5 1042 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 FLVCR1Q9Y5Y0 555 aa14.51□□□□□ -0.09
SF3A1-209ENST00000496189 CIB4A0PJX0 185 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 OR6C65A6NJZ3 312 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 AKAP8O43823 692 aaKnown RBP14.5□□□□□ -0.09
SF3A1-209ENST00000496189 OR5F1O95221 314 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 THRBP10828 461 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 ZNF43P17038 809 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 TNFRSF1BP20333 461 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 CRYGSP22914 178 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 CCKARP32238 428 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 TGFBR3Q03167 851 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 C1DQ13901 141 aaKnown RBP14.5□□□□□ -0.09
SF3A1-209ENST00000496189 TRIM25Q14258 630 aaKnown RBP14.5□□□□□ -0.09
SF3A1-209ENST00000496189 BHLHA15Q7RTS1 189 aaPredicted RBP14.5□□□□□ -0.09
SF3A1-209ENST00000496189 AAED1Q7RTV5 226 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 VTCN1Q7Z7D3 282 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 DHFR2Q86XF0 187 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 CDC20BQ86Y33 519 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 OR9K2Q8NGE7 335 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 HSD17B8Q92506 261 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 MCUR1Q96AQ8 359 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 MUCL1Q96DR8 90 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 PIK3IP1Q96FE7 263 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 SLC41A3Q96GZ6 507 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 ACTR3BQ9P1U1 418 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 PRSS50Q9UI38 385 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 SLC7A7Q9UM01 511 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 B3GALT5Q9Y2C3 310 aa14.5□□□□□ -0.09
SF3A1-209ENST00000496189 FAM32AQ9Y421 112 aaKnown RBP14.5□□□□□ -0.09
SF3A1-209ENST00000496189 ABCA12Q86UK0 2595 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 FAM221AA4D161 298 aa14.49□□□□□ -0.09
SF3A1-209ENST00000496189 ENO4A6NNW6 628 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms