RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CCDC137Q6PK04 289 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 OPN5Q6U736 354 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 ZNF66Q6ZN08 573 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 KCTD9Q7L273 389 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 LRRC70Q7Z2Q7 622 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 SPATA21Q7Z572 469 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 PATL1Q86TB9 770 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 LACC1Q8IV20 430 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 KLHL7Q8IXQ5 586 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 TBC1D19Q8N5T2 526 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 TTLQ8NG68 377 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 OR2AJ1Q8NGZ0 328 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 NEIL3Q8TAT5 605 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 ZNF473Q8WTR7 871 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 FAM222BQ8WU58 562 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 DAZLQ92904 295 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 MAGOHBQ96A72 148 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 OTULINQ96BN8 352 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 OTUB1Q96FW1 271 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 CFAP36Q96G28 342 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 VPS39Q96JC1 886 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 ZNF597Q96LX8 424 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 F2RL3Q96RI0 385 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 CPNE1Q99829 537 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 MAPKAP1Q9BPZ7 522 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 CCDC77Q9BR77 488 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 OR8D2Q9GZM6 311 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 DERL2Q9GZP9 239 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 SLC5A7Q9GZV3 580 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 WWTR1Q9GZV5 400 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 DDX47Q9H0S4 455 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 FAM234AQ9H0X4 552 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 NT5DC2Q9H857 520 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 POPDC3Q9HBV1 291 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 ACKR4Q9NPB9 350 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 QPCTLQ9NXS2 382 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 RHCGQ9UBD6 479 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 RNF150Q9ULK6 438 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 ZNF490Q9ULM2 529 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 BOKQ9UMX3 212 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 MRPS33Q9Y291 106 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 C15orf41Q9Y2V0 281 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 CHD3Q12873 2000 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 NCF1BA6NI72 391 aaPredicted RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 CD8B2A6NJW9 211 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 NCF1CA8MVU1 366 aaPredicted RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 ZNF814B7Z6K7 855 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 PLPP1O14494 284 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 TIMM23O14925 209 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 CTNSO60931 367 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 PIAS1O75925 651 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 AIFM1O95831 613 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 HPNP05981 417 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 NCF1P14598 390 aaPredicted RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 CD1DP15813 335 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 LBPP18428 481 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 ZNF10P21506 573 aaPredicted RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 GDF1P27539 372 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 OPRM1P35372 400 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 TIMP3P35625 211 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 PEX19P40855 299 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 ELK3P41970 407 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 CDK9P50750 372 aaKnown RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 PROK1P58294 105 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 HERVK_113P63132 956 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 ERVK-8P63133 956 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 KCNJ2P63252 427 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 CSNK2A1P68400 391 aaPredicted RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 DEFA6Q01524 100 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 ASPHQ12797 758 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 DLG1Q12959 904 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 SERTAD2Q14140 314 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 DOC2AQ14183 400 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 SLC10A1Q14973 349 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 EFTUD2Q15029 972 aaKnown RBP eCLIP3.77□□□□□ -1.81
VPS52-222ENST00000495981 PDK4Q16654 411 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 PIGGQ5H8A4 983 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 WLSQ5T9L3 541 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 FRG2Q64ET8 278 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 C18orf63Q68DL7 685 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 ZNF782Q6ZMW2 699 aaPredicted RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 PEX5LQ8IYB4 626 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 DND1Q8IYX4 353 aaKnown RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 ZCCHC7Q8N3Z6 543 aaKnown RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 RNF175Q8N4F7 328 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 ACOT4Q8N9L9 421 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 C9orf106Q8NAJ2 232 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 NEXN-AS1Q8NBZ9 246 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 BBOF1Q8ND07 529 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 CSNK2A3Q8NEV1 391 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 LINC01560Q8TB33 94 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 SLC22A8Q8TCC7 542 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 RNASE8Q8TDE3 154 aaKnown RBP3.77□□□□□ -1.81
VPS52-222ENST00000495981 ACTRT1Q8TDG2 376 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 RNF138Q8WVD3 245 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 SMPDL3BQ92485 455 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 NSMAFQ92636 917 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 TAAR8Q969N4 342 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 ESAMQ96AP7 390 aa3.77□□□□□ -1.81
VPS52-222ENST00000495981 MARK4Q96L34 752 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms