RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 NIPSNAP1Q9BPW8 284 aa17.44■□□□□ 0.38
ATG3-208ENST00000495756 C9orf16Q9BUW7 83 aa17.44■□□□□ 0.38
ATG3-208ENST00000495756 OSBPL10Q9BXB5 764 aa17.44■□□□□ 0.38
ATG3-208ENST00000495756 SMURF2Q9HAU4 748 aa17.44■□□□□ 0.38
ATG3-208ENST00000495756 MRPL39Q9NYK5 338 aaKnown RBP17.44■□□□□ 0.38
ATG3-208ENST00000495756 SEC14L4Q9UDX3 406 aa17.44■□□□□ 0.38
ATG3-208ENST00000495756 KIAA1549Q9HCM3 1950 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 CLCA1A8K7I4 914 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 B8ZZF3 427 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 PRRG2O14669 202 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 CASQ2O14958 399 aaPredicted RBP17.43■□□□□ 0.38
ATG3-208ENST00000495756 HIST1H2ABP04908 130 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 KLK2P20151 261 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 ENPP1P22413 925 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 SLC9A3P48764 834 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 DAPP51397 102 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 H1FNTQ75WM6 255 aaPredicted RBP17.43■□□□□ 0.38
ATG3-208ENST00000495756 HIST3H2AQ7L7L0 130 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 ADGRE4PQ86SQ3 457 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 OAFQ86UD1 273 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 ZNF843Q8N446 348 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 CBR4Q8N4T8 237 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 TMEM99Q8N816 258 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 OR5J2Q8NH18 312 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 HIST1H2ACQ93077 130 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 UCN2Q96RP3 112 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 ZNF556Q9HAH1 456 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 CHST11Q9NPF2 352 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 KIF17Q9P2E2 1029 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 MCTS1Q9ULC4 181 aaKnown RBP17.43■□□□□ 0.38
ATG3-208ENST00000495756 B3GALT5Q9Y2C3 310 aa17.43■□□□□ 0.38
ATG3-208ENST00000495756 IGHV3-15A0A0B4J1V0 119 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 UNC119BA6NIH7 251 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 AQP7P3A6NL99 342 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 FIGNL2A6NMB9 653 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 ZNF814B7Z6K7 855 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 SMAD9O15198 467 aaKnown RBP17.42■□□□□ 0.38
ATG3-208ENST00000495756 WDR1O75083 606 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 SYNGR4O95473 234 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 GABRA1P14867 456 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 PEX2P28328 305 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 PPP2R2BQ00005 443 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 PMS2P3Q13401 168 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 FHL1Q13642 323 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 PON3Q15166 354 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 SF3B4Q15427 424 aaKnown RBP eCLIP17.42■□□□□ 0.38
ATG3-208ENST00000495756 ACSF3Q4G176 576 aaPredicted RBP17.42■□□□□ 0.38
ATG3-208ENST00000495756 LPCAT4Q643R3 524 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 CD300LDQ6UXZ3 194 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 Q6ZPB1 254 aaPredicted RBP17.42■□□□□ 0.38
ATG3-208ENST00000495756 NANOGNBQ7Z5D8 188 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 OR51A7Q8NH64 312 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 FNDC9Q8TBE3 224 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 RBM4BQ9BQ04 359 aaKnown RBP17.42■□□□□ 0.38
ATG3-208ENST00000495756 NAA11Q9BSU3 229 aaPredicted RBP17.42■□□□□ 0.38
ATG3-208ENST00000495756 RBM4Q9BWF3 364 aaKnown RBP17.42■□□□□ 0.38
ATG3-208ENST00000495756 ZNF175Q9Y473 711 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 POLEQ07864 2286 aa17.42■□□□□ 0.38
ATG3-208ENST00000495756 TRAV27A0A087WT01 109 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 SOCS2O14508 198 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 EI24O14681 340 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 C1QL1O75973 258 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 GSTM3P21266 225 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 PTGER4P35408 488 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 P2RY4P51582 365 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 RPS4XP62701 263 aaKnown RBP17.41■□□□□ 0.38
ATG3-208ENST00000495756 COX10Q12887 443 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 DAG1Q14118 895 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 ZBED5Q49AG3 693 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 FBXW10Q5XX13 1052 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 KDM4DQ6B0I6 523 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 PPP4R4Q6NUP7 873 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 PLXDC2Q6UX71 529 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 ZBTB49Q6ZSB9 765 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 DOLPP1Q86YN1 238 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 CCDC103Q8IW40 242 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 ADPRHL1Q8NDY3 354 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 DNAJC9Q8WXX5 260 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 ROBO4Q8WZ75 1007 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 TNFRSF13CQ96RJ3 184 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 UCK2Q9BZX2 261 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 SIGLEC7Q9Y286 467 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 HIF3AQ9Y2N7 669 aa17.41■□□□□ 0.38
ATG3-208ENST00000495756 SLC22A20A6NK97 555 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 BLOC1S5-TXNDC5H3BN57 136 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 PLPP3O14495 311 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 PTP4A3O75365 173 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 ALPLP05186 524 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 TSPAN19P0C672 248 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 ACVR2AP27037 513 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 UQCRC1P31930 480 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 TLE1Q04724 770 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 LRRC36Q1X8D7 754 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 ANKDD1AQ495B1 522 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 OGFRL1Q5TC84 451 aaPredicted RBP17.4■□□□□ 0.38
ATG3-208ENST00000495756 KLHL17Q6TDP4 642 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 FCRLAQ7L513 359 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 MAGEE2Q8TD90 523 aaPredicted RBP17.4■□□□□ 0.38
ATG3-208ENST00000495756 TRIB1Q96RU8 372 aa17.4■□□□□ 0.38
ATG3-208ENST00000495756 SLC29A1Q99808 456 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms