RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 AIG1Q9NVV5 245 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 CDHR4A6H8M9 788 aa11□□□□□ -0.65
SKA1-205ENST00000494518 VWC2LB2RUY7 222 aa11□□□□□ -0.65
SKA1-205ENST00000494518 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
SKA1-205ENST00000494518 FAAHO00519 579 aa11□□□□□ -0.65
SKA1-205ENST00000494518 BIRC5O15392 142 aa11□□□□□ -0.65
SKA1-205ENST00000494518 FRS3O43559 492 aa11□□□□□ -0.65
SKA1-205ENST00000494518 UPK3AO75631 287 aa11□□□□□ -0.65
SKA1-205ENST00000494518 BCHEP06276 602 aa11□□□□□ -0.65
SKA1-205ENST00000494518 PGRP06401 933 aa11□□□□□ -0.65
SKA1-205ENST00000494518 CELA3BP08861 270 aa11□□□□□ -0.65
SKA1-205ENST00000494518 NCF2P19878 526 aaPredicted RBP11□□□□□ -0.65
SKA1-205ENST00000494518 EPHA3P29320 983 aa11□□□□□ -0.65
SKA1-205ENST00000494518 CALCRP30988 508 aa11□□□□□ -0.65
SKA1-205ENST00000494518 ACAA2P42765 397 aaKnown RBP11□□□□□ -0.65
SKA1-205ENST00000494518 ANXA11P50995 505 aaKnown RBP11□□□□□ -0.65
SKA1-205ENST00000494518 P2RY4P51582 365 aa11□□□□□ -0.65
SKA1-205ENST00000494518 UBE2NP61088 152 aaKnown RBP11□□□□□ -0.65
SKA1-205ENST00000494518 BST1Q10588 318 aa11□□□□□ -0.65
SKA1-205ENST00000494518 STX3Q13277 289 aa11□□□□□ -0.65
SKA1-205ENST00000494518 MPP2Q14168 576 aa11□□□□□ -0.65
SKA1-205ENST00000494518 GTDC1Q4AE62 458 aa11□□□□□ -0.65
SKA1-205ENST00000494518 FAM120AOSQ5T036 256 aa11□□□□□ -0.65
SKA1-205ENST00000494518 PRAMEF8Q5VWM4 474 aa11□□□□□ -0.65
SKA1-205ENST00000494518 PRAMEF7Q5VXH5 474 aa11□□□□□ -0.65
SKA1-205ENST00000494518 ATG16L1Q676U5 607 aa11□□□□□ -0.65
SKA1-205ENST00000494518 MYPOPQ86VE0 399 aaPredicted RBP11□□□□□ -0.65
SKA1-205ENST00000494518 CLIP4Q8N3C7 705 aa11□□□□□ -0.65
SKA1-205ENST00000494518 SLC25A36Q96CQ1 311 aa11□□□□□ -0.65
SKA1-205ENST00000494518 TRIM44Q96DX7 344 aaPredicted RBP11□□□□□ -0.65
SKA1-205ENST00000494518 SOX7Q9BT81 388 aa11□□□□□ -0.65
SKA1-205ENST00000494518 SF3B5Q9BWJ5 86 aaKnown RBP11□□□□□ -0.65
SKA1-205ENST00000494518 WDR55Q9H6Y2 383 aaPredicted RBP11□□□□□ -0.65
SKA1-205ENST00000494518 KCNK9Q9NPC2 374 aa11□□□□□ -0.65
SKA1-205ENST00000494518 CA10Q9NS85 328 aa11□□□□□ -0.65
SKA1-205ENST00000494518 TMEM45AQ9NWC5 275 aa11□□□□□ -0.65
SKA1-205ENST00000494518 TMEM160Q9NX00 188 aa11□□□□□ -0.65
SKA1-205ENST00000494518 SEC14L4Q9UDX3 406 aa11□□□□□ -0.65
SKA1-205ENST00000494518 ZNF443Q9Y2A4 671 aaPredicted RBP11□□□□□ -0.65
SKA1-205ENST00000494518 EPB41L3Q9Y2J2 1087 aaPredicted RBP11□□□□□ -0.65
SKA1-205ENST00000494518 LRP5LA4QPB2 252 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 OR4A8P0C604 315 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 CECR9P0C854 216 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 KITP10721 976 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 SERPINF1P36955 418 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 CRATP43155 626 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 COPZ1P61923 177 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 HOXC5Q00444 222 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 NAAAQ02083 359 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 ADIPOQQ15848 244 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 LIN52Q52LA3 116 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 C1orf140Q5VVS0 124 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 WBP2NLQ6ICG8 309 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 CREB3L2Q70SY1 520 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 ABHD12BQ7Z5M8 362 aaPredicted RBP10.99□□□□□ -0.65
SKA1-205ENST00000494518 SERPINA11Q86U17 422 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 EPHX4Q8IUS5 362 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 ZNF440Q8IYI8 595 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 LRRC34Q8IZ02 419 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 ZCCHC24Q8N2G6 241 aaKnown RBP10.99□□□□□ -0.65
SKA1-205ENST00000494518 ANKRD42Q8N9B4 389 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 BCL2L2Q92843 193 aaPredicted RBP10.99□□□□□ -0.65
SKA1-205ENST00000494518 ZBTB18Q99592 522 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 BPESC1Q9GZL8 116 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 NELFAQ9H3P2 528 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 P2RX2Q9UBL9 471 aa10.99□□□□□ -0.65
SKA1-205ENST00000494518 A8MVM7 634 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 RFXANKO14593 260 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 GPR37O15354 613 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 SEC14L2O76054 403 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 KRT75O95678 551 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 TGFAP01135 160 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 CRYAAP02489 173 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 CLDN17P56750 224 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 DSTNP60981 165 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 ROR2Q01974 943 aaKnown RBP10.98□□□□□ -0.65
SKA1-205ENST00000494518 GSTA3Q16772 222 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 SWT1Q5T5J6 900 aaKnown RBP10.98□□□□□ -0.65
SKA1-205ENST00000494518 NXNQ6DKJ4 435 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 OGFOD2Q6N063 350 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 ANKRD16Q6P6B7 361 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 TMEM19Q96HH6 336 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 KATNB1Q9BVA0 655 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 TMEM109Q9BVC6 243 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 HAO1Q9UJM8 370 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 CHST2Q9Y4C5 530 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 GPR45Q9Y5Y3 372 aa10.98□□□□□ -0.65
SKA1-205ENST00000494518 LOC390937A0A1W2PQ73 354 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 SH3PXD2BA1X283 911 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 ZNF503-AS2A6NEH8 195 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 B9A039 149 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 hCG_2039718K7EN88 272 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 NDUFS8O00217 210 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 TM9SF1O15321 606 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 AHSA1O95433 338 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 ANP32DO95626 131 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 PNMTP11086 282 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 CBLP22681 906 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 IL2RGP31785 369 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 THBS4P35443 961 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms