RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 COX20Q5RI15 118 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 C1orf140Q5VVS0 124 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 ZNF836Q6ZNA1 936 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 LRRC74BQ6ZQY2 392 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 VRK2Q86Y07 508 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 ZNF440Q8IYI8 595 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 LRRC34Q8IZ02 419 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 ZCCHC24Q8N2G6 241 aaKnown RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 KDM8Q8N371 416 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 EIF1ADQ8N9N8 165 aaKnown RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 OR52P1PQ8NH57 321 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 RNF217Q8TC41 542 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 TESCQ96BS2 214 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 TRIM44Q96DX7 344 aaPredicted RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 KATNB1Q9BVA0 655 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 SF3B5Q9BWJ5 86 aaKnown RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 SLC38A1Q9H2H9 487 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 TPK1Q9H3S4 243 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 NARFLQ9H6Q4 476 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 MTHFD2LQ9H903 347 aaPredicted RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 OBP2BQ9NPH6 170 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 P2RX2Q9UBL9 471 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 LGALS13Q9UHV8 139 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 RAP2CQ9Y3L5 183 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 A8MVM7 634 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 VWC2LB2RUY7 222 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 RFXANKO14593 260 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 FRS3O43559 492 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 UPK3AO75631 287 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 RGS9O75916 674 aaPredicted RBP8.37□□□□□ -1.07
UBR4-216ENST00000494503 SEC14L2O76054 403 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 KRT75O95678 551 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 GUSBP08236 651 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 CELA3BP08861 270 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 IFNGR1P15260 489 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ZNF43P17038 809 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 NPR2P20594 1047 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 BGNP21810 368 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 CALCRP30988 508 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 RPS5P46782 204 aaKnown RBP8.37□□□□□ -1.07
UBR4-216ENST00000494503 MAP2K6P52564 334 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 CLDN17P56750 224 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 SNTB2Q13425 540 aaKnown RBP8.37□□□□□ -1.07
UBR4-216ENST00000494503 LARS2Q15031 903 aaKnown RBP8.37□□□□□ -1.07
UBR4-216ENST00000494503 ADRM1Q16186 407 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 KRT71Q3SY84 523 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 RPS26P11Q5JNZ5 115 aaPredicted RBP8.37□□□□□ -1.07
UBR4-216ENST00000494503 NXNQ6DKJ4 435 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 WBP2NLQ6ICG8 309 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 KRT80Q6KB66 452 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ANKRD16Q6P6B7 361 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 GPR137CQ8N3F9 429 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ZIC4Q8N9L1 334 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 OR4F15Q8NGB8 312 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 CCDC115Q96NT0 180 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ZIM3Q96PE6 472 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 SOX7Q9BT81 388 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 PLK3Q9H4B4 646 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ARMC7Q9H6L4 198 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 SEC61A2Q9H9S3 476 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 LPAR2Q9HBW0 351 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 CRLF2Q9HC73 371 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 KCNK9Q9NPC2 374 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 RPS6KB2Q9UBS0 482 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 TMEFF2Q9UIK5 374 aaPredicted RBP8.37□□□□□ -1.07
UBR4-216ENST00000494503 BTNL2Q9UIR0 455 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ZNF232Q9UNY5 417 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 ZNF443Q9Y2A4 671 aaPredicted RBP8.37□□□□□ -1.07
UBR4-216ENST00000494503 PCDHB14Q9Y5E9 798 aa8.37□□□□□ -1.07
UBR4-216ENST00000494503 CDHR4A6H8M9 788 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 RGS16O15492 202 aaPredicted RBP8.36□□□□□ -1.07
UBR4-216ENST00000494503 SLC43A1O75387 559 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 PDE5AO76074 875 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 VAMP5O95183 116 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 STAMBPO95630 424 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 PGRP06401 933 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 ADRA2AP08913 450 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 KITP10721 976 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 CD79AP11912 226 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 ETFAP13804 333 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 ITGA2P17301 1181 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 CBLP22681 906 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 IL2RGP31785 369 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 THBS2P35442 1172 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 THBS4P35443 961 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 PPOXP50336 477 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 CRISP3P54108 245 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 ARF1P84077 181 aaKnown RBP8.36□□□□□ -1.07
UBR4-216ENST00000494503 GSTA3Q16772 222 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 C6orf10Q5SRN2 563 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 CARD17Q5XLA6 110 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 SHQ1Q6PI26 577 aaKnown RBP8.36□□□□□ -1.07
UBR4-216ENST00000494503 C12orf54Q6X4T0 127 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 CREB3L2Q70SY1 520 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 LINC01356Q8N9X3 169 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 CKAP2Q8WWK9 683 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.36□□□□□ -1.07
UBR4-216ENST00000494503 C1orf159Q96HA4 380 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 TEX37Q96LM6 180 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms