RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
TRA2A-209ENST00000494255 PRSS27Q9BQR3 290 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 ZNF426Q9BUY5 554 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 SF3B5Q9BWJ5 86 aaKnown RBP11.1□□□□□ -0.63
TRA2A-209ENST00000494255 FANCFQ9NPI8 374 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 PLSCR4Q9NRQ2 329 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 RHCGQ9UBD6 479 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 RASD1Q9Y272 281 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 NOSIPQ9Y314 301 aaKnown RBP11.1□□□□□ -0.63
TRA2A-209ENST00000494255 MED31Q9Y3C7 131 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 HCFC1P51610 2035 aa11.1□□□□□ -0.63
TRA2A-209ENST00000494255 ICE1Q9Y2F5 2266 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 ZNF716A6NP11 495 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 A8MXE2 369 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 M0R082 166 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 EBAG9O00559 213 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 CH25HO95992 272 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 MT-ND1P03886 318 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 HIST1H2ABP04908 130 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 FABP3P05413 133 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 NQO1P15559 274 aaKnown RBP11.09□□□□□ -0.63
TRA2A-209ENST00000494255 VLDLRP98155 873 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 MS4A2Q01362 244 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 IL1RL1Q01638 556 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 PMS2P3Q13401 168 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 SLC17A1Q14916 467 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 SP5Q6BEB4 398 aaPredicted RBP11.09□□□□□ -0.63
TRA2A-209ENST00000494255 HIST3H2AQ7L7L0 130 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 NUFIP2Q7Z417 695 aaKnown RBP11.09□□□□□ -0.63
TRA2A-209ENST00000494255 ZNF100Q8IYN0 542 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 ZNF417Q8TAU3 575 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 HIST1H2ACQ93077 130 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 C7orf34Q96L11 122 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 ZNF587Q96SQ5 575 aaPredicted RBP11.09□□□□□ -0.63
TRA2A-209ENST00000494255 NDUFAF4Q9P032 175 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 ING1Q9UK53 422 aaPredicted RBP11.09□□□□□ -0.63
TRA2A-209ENST00000494255 B3GALT5Q9Y2C3 310 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 LRRK2Q5S007 2527 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 BAHCC1Q9P281 2608 aa11.09□□□□□ -0.63
TRA2A-209ENST00000494255 C19orf84I3L1E1 186 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 FFAR1O14842 300 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 GSC2O15499 205 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 FZD7O75084 574 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 H1F0P07305 194 aaKnown RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 UMPSP11172 480 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 COX6B1P14854 86 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 PEX19P40855 299 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 UGT2B15P54855 530 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 SMIM11AP58511 58 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 PGM2L1Q6PCE3 622 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ZNF730Q6ZMV8 503 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 BEND4Q6ZU67 534 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 RRM2BQ7LG56 351 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ZDHHC21Q8IVQ6 265 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 SCAIQ8N9R8 606 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ADPRHL1Q8NDY3 354 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 OR9K2Q8NGE7 335 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 OXGR1Q96P68 337 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 MOGAT1Q96PD6 335 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 SEPHS2Q99611 448 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 PIP5K1AQ99755 562 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 CADM1Q9BY67 442 aaKnown RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ANKRD19PQ9H560 264 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 FKRPQ9H9S5 495 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 NMNAT1Q9HAN9 279 aaPredicted RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 NANSQ9NR45 359 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 PARPBPQ9NWS1 579 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 GALNT8Q9NY28 637 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ELOVL5Q9NYP7 299 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 TCRBV5S2A0A599 114 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 HTR3EA5X5Y0 456 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ENO4A6NNW6 628 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 MRPL33O75394 65 aaKnown RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 IGF2P01344 180 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 SEMG1P04279 462 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 POU2F1P14859 743 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 COL8A1P27658 744 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 OR3A2P47893 321 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 P2RY4P51582 365 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 CHRNB3Q05901 458 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 C1DQ13901 141 aaKnown RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 FLOT2Q14254 428 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ZNF74Q16587 644 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 EXOC3L2Q2M3D2 409 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 FAM98BQ52LJ0 330 aaKnown RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 FGD3Q5JSP0 725 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 TFAP2EQ6VUC0 442 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 MEX3BQ6ZN04 569 aaKnown RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 TSEN54Q7Z6J9 526 aaKnown RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 PIK3C3Q8NEB9 887 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 OR5J2Q8NH18 312 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 PFN4Q8NHR9 129 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 SGTBQ96EQ0 304 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 ZNF347Q96SE7 839 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 LRMDAQ9H2I8 198 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 MMADHCQ9H3L0 296 aaPredicted RBP11.08□□□□□ -0.64
TRA2A-209ENST00000494255 MAGIXQ9H6Y5 334 aa11.08□□□□□ -0.64
TRA2A-209ENST00000494255 SLC24A3Q9HC58 644 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms