RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 KLF17Q5JT82 389 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 PPP1R42Q7Z4L9 355 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 NKAPP1Q8N9T2 125 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 MRPS31Q92665 395 aaKnown RBP4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 RPUSD4Q96CM3 377 aaKnown RBP4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 SLC35A5Q9BS91 424 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 SPATA16Q9BXB7 569 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 RHBGQ9H310 441 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 PLGRKTQ9HBL7 147 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 CHMP5Q9NZZ3 219 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 MTRF1LQ9UGC7 380 aaKnown RBP4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 ERVW-1Q9UQF0 538 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 LRP6O75581 1613 aa4.39□□□□□ -1.71
HMGB3P14-201ENST00000494195 VIRMAQ69YN4 1812 aaKnown RBP4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 IGHV3OR16-13A0A075B7E8 117 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 A6NDX4 124 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 VSTM2BA6NLU5 285 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 FAM166BA8MTA8 275 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 G3V4G9 280 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 HIP1O00291 1037 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 SURF6O75683 361 aaKnown RBP4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 NT5EP21589 574 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 CCNCP24863 283 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 HTR1FP30939 366 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 YWHABP31946 246 aaKnown RBP4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 HPCAL1P37235 193 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 CSNK1DP48730 415 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 BIDP55957 195 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 EBI3Q14213 229 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 RABL6Q3YEC7 729 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 ZNF786Q8N393 782 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 DHRSXQ8N5I4 330 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 CLDN19Q8N6F1 224 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 FADS6Q8N9I5 356 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 Q8N9W7 124 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 CCDC110Q8TBZ0 833 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 NRIP2Q9BQI9 281 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 ZNF416Q9BWM5 594 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 NXF5Q9H1B4 397 aaKnown RBP4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 KIF25Q9UIL4 384 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 NOTCH2Q04721 2471 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 COL22A1Q8NFW1 1626 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 RFX7Q2KHR2 1363 aa4.38□□□□□ -1.71
HMGB3P14-201ENST00000494195 SIPA1L3O60292 1781 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 KCPQ6ZWJ8 1503 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 GLI3P10071 1580 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 MFN2O95140 757 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 IGKV5-2P06315 115 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 CHMLP26374 656 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 CCDC57Q2TAC2 916 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 FAM71F2Q6NXP2 309 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 COPS6Q7L5N1 327 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 RAPGEF5Q92565 580 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 C4orf36Q96KX1 117 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 CCNL2Q96S94 520 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 TAS2R3Q9NYW6 316 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 TBK1Q9UHD2 729 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 ASTN1O14525 1302 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 SF3B1O75533 1304 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 RAD50Q92878 1312 aa4.37□□□□□ -1.71
HMGB3P14-201ENST00000494195 PAPPAQ13219 1627 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 LTBP4Q8N2S1 1624 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 ABCA3Q99758 1704 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 COL14A1Q05707 1796 aaKnown RBP4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 NPIPA7E9PJI5 369 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 MAPK13O15264 365 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 ZSCAN12O43309 604 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 OR1F1O43749 312 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 FAM189A1O60320 539 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 NEBLO76041 1014 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 UFL1O94874 794 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 DIRAS3O95661 229 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 LGI1O95970 557 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 MMP1P03956 469 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 NPIPA8P0DM63 369 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 FGF9P31371 208 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 HSD17B7P56937 341 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 SLC39A6Q13433 755 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 MXD4Q14582 209 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 C11orf71Q6IPW1 123 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 ACOT1Q86TX2 421 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 ZNF429Q86V71 674 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 PNKDQ8N490 385 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 MDS2Q8NDY4 140 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 OR51S1Q8NGJ8 323 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 MARCH1Q8TCQ1 289 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 RAET1EQ8TD07 263 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 SPRYD4Q8WW59 207 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 PIGCQ92535 297 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 HIST1H4GQ99525 98 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 SELENOIQ9C0D9 397 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 MEAF6Q9HAF1 191 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 PHF11Q9UIL8 331 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 ISY1Q9ULR0 285 aaKnown RBP4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 NPIPA1Q9UND3 350 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 XIRP1Q702N8 1843 aaKnown RBP4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 ATP8B3O60423 1300 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 BCL9O00512 1426 aa4.36□□□□□ -1.71
HMGB3P14-201ENST00000494195 PLCH1Q4KWH8 1693 aa4.35□□□□□ -1.71
HMGB3P14-201ENST00000494195 NKX2-6A6NCS4 301 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms