RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SLC25A1P53007 311 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 CTXN1P60606 82 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 LGALS3BPQ08380 585 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 FOXF1Q12946 379 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 HNRNPA0Q13151 305 aaKnown RBP9.66□□□□□ -0.86
CLCN6-208ENST00000494028 IL10RAQ13651 578 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 C11orf91Q3C1V1 193 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 CRTC2Q53ET0 693 aaPredicted RBP9.66□□□□□ -0.86
CLCN6-208ENST00000494028 LINC01590Q5TEZ4 76 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 FAM69BQ5VUD6 431 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 LEG1Q6P5S2 330 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 TUBA3EQ6PEY2 450 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 POMZP3Q6PJE2 187 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 LYPD4Q6UWN0 246 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 CCDC190Q86UF4 302 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 JAZF1Q86VZ6 243 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 SNX29P2Q8IUI4 249 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 SLC35F2Q8IXU6 374 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 GHDCQ8N2G8 530 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 CENPSQ8N2Z9 138 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 OR5L2Q8NGL0 311 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 OR5J2Q8NH18 312 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 SLC22A8Q8TCC7 542 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 SMAP2Q8WU79 429 aaPredicted RBP9.66□□□□□ -0.86
CLCN6-208ENST00000494028 ZNRF4Q8WWF5 429 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 SLC25A46Q96AG3 418 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 C4orf36Q96KX1 117 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 KCTD7Q96MP8 289 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 WDFY2Q96P53 400 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 NMNAT3Q96T66 252 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 NPAS1Q99742 590 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 COQ7Q99807 217 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 TMED9Q9BVK6 235 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 TTTY10Q9BZA0 68 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 ARRDC1-AS1Q9H2J1 176 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 GALNT9Q9HCQ5 603 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 TRIM36Q9NQ86 728 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 SNTG1Q9NSN8 517 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 ST6GALNAC2Q9UJ37 374 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 COPS3Q9UNS2 423 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 POLHQ9Y253 713 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 TMED7Q9Y3B3 224 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 PCDHGB6Q9Y5F9 930 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 PCDHGA5Q9Y5G8 931 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
CLCN6-208ENST00000494028 KIAA1549Q9HCM3 1950 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 IGLV3-32A0A0A0MS00 114 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 TEX51A0A1B0GUA7 166 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 A0A1W2PQL4 384 aaPredicted RBP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 SHISA3A0PJX4 238 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CD8B2A6NJW9 211 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 PRR33A8MZF0 331 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 B4E171 279 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 E9PI62 339 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 DVL2O14641 736 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 MAGEB3O15480 346 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 SERPINI2O75830 405 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ZFAND5O76080 213 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 GLCEO94923 617 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 MT-ATP6P00846 226 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 IGHMP01871 453 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CELA2AP08217 269 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 FBXO45P0C2W1 286 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CD8BP10966 210 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 COX6A1P12074 109 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF12P17014 697 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 PRKCAP17252 672 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CELP19835 753 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 GALP22466 123 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CXCR1P25024 350 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 PYCR1P32322 319 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 TSPAN7P41732 249 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CDKN2AP42771 156 aaKnown RBP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 TMED10P49755 219 aaKnown RBP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 PPP5CP53041 499 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 TAS2R43P59537 309 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ATP1A4Q13733 1029 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 SGCBQ16585 318 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 RGS21Q2M5E4 152 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 CDONQ4KMG0 1287 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 EMC4Q5J8M3 183 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 PLA2G2CQ5R387 149 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 C1QL3Q5VWW1 255 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 BICRALQ6AI39 1079 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 FAM199XQ6PEV8 388 aaPredicted RBP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ZNF517Q6ZMY9 492 aaPredicted RBP9.65□□□□□ -0.86
CLCN6-208ENST00000494028 DBX2Q6ZNG2 339 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 DCDC5Q6ZRR9 648 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 GPALPP1Q8IXQ4 340 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 OR51L1Q8NGJ5 315 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 STK35Q8TDR2 534 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ELP5Q8TE02 316 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ASB15Q8WXK1 588 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 ST8SIA1Q92185 356 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 TTC9Q92623 222 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 MR1Q95460 341 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 LOXL4Q96JB6 756 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 PGLYRP3Q96LB9 341 aa9.65□□□□□ -0.86
CLCN6-208ENST00000494028 KCNS3Q9BQ31 491 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms