RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PCDHB14Q9Y5E9 798 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ALG5Q9Y673 324 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 U3KQV3 271 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ARHGAP21Q5T5U3 1957 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 NF1P21359 2839 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 PRRC2AP48634 2157 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 A0A0A6YYD5 115 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 A0A1W2PR48 441 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 A8MVJ9 347 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 NPIPA2E9PIF3 369 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 NPIPA3F8WFD2 350 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 H7C2Y5 167 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 CLDN4O14493 209 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 OR7A17O14581 309 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 AP3D1O14617 1153 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 PGRMC2O15173 223 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ST8SIA5O15466 376 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 XPNPEP2O43895 674 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 KLK8O60259 260 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 DHFRP00374 187 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 LALBAP00709 142 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 S100A8P05109 93 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 PGRP06401 933 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 S100A9P06702 114 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 SBK3P0C264 359 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ANXA3P12429 323 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 COX6B1P14854 86 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF250P15622 560 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 HK1P19367 917 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 FMO3P31513 532 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 SOX18P35713 384 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 MAGEA5P43359 124 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 GDI2P50395 445 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 SMSP52788 366 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 CASP6P55212 293 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 PPIAP62937 165 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 PSPHP78330 225 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 RPP38P78345 283 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF91Q05481 1191 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 TFF3Q07654 80 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 LGALS3BPQ08380 585 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 STX4Q12846 297 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 BTN1A1Q13410 526 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 LTB4RQ15722 352 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 AP5B1Q2VPB7 878 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF791Q3KP31 576 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 VPS26BQ4G0F5 336 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 TECRLQ5HYJ1 363 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 HES5Q5TA89 166 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 HACD4Q5VWC8 232 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 KDM4DQ6B0I6 523 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 KLHL17Q6TDP4 642 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 RTL4Q6ZR62 310 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 PGAP1Q75T13 922 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 IFNEQ86WN2 208 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 POGLUT1Q8NBL1 392 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 FAM98AQ8NCA5 519 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 MORN4Q8NDC4 146 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 OR52B6Q8NGF0 335 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 OR14A16Q8NHC5 309 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 CNIH3Q8TBE1 160 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 WDR20Q8TBZ3 569 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF675Q8TD23 568 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 HGDQ93099 445 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 PHF21AQ96BD5 680 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 TREX2Q9BQ50 279 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 MARVELD1Q9BSK0 173 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 CNPPD1Q9BV87 410 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 TTTY12Q9BZ98 90 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF436Q9C0F3 470 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 FN3KQ9H479 309 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ZDHHC11Q9H8X9 412 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 SMURF2Q9HAU4 748 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 MCCC2Q9HCC0 563 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 C14orf119Q9NWQ9 140 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 ERVK13-1Q9NX77 482 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 SPRR3Q9UBC9 169 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 NDRG4Q9ULP0 352 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 MRPS33Q9Y291 106 aaKnown RBP7.44□□□□□ -1.22
HDAC6-234ENST00000493923 FAM215AQ9Y5M1 114 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 CLCA3PQ9Y6N3 262 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 V9GYH0 126 aa7.44□□□□□ -1.22
HDAC6-234ENST00000493923 LOC100506127A0A0U1RQW1 187 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 FAM240BA0A1B0GVZ2 78 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 A0A1W2PPL8 197 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM82A0PJX8 343 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 LRRC3CA6NJW4 275 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 FAM90A27PA6NNH2 459 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM233B4DJY2 109 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 KLRC4-KLRK1H3BQV0 150 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PRRG2O14669 202 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 AZIN1O14977 448 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 AKR7A2O43488 359 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 SSX4O60224 188 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 KIAA0513O60268 411 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TSC22D2O75157 780 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 SLC22A3O75751 556 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TOXO94900 526 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 AIFM1O95831 613 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 LCKP06239 509 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms