RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CABIN1Q9Y6J0 2220 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 PRR23D1E9PI22 279 aaPredicted RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 MRPL3P09001 348 aaKnown RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 PRR23D2P0DMB1 279 aaPredicted RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 RPS5P46782 204 aaKnown RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 SLC37A1P57057 533 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 KLHL12Q53G59 568 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 IDNKQ5T6J7 187 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 POMZP3Q6PJE2 187 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 ASB18Q6ZVZ8 466 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 MAMDC2Q7Z304 686 aaPredicted RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 GHDCQ8N2G8 530 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 D2HGDHQ8N465 521 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 SLC37A3Q8NCC5 494 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 SVIPQ8NHG7 77 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 AKAP1Q92667 903 aaKnown RBP eCLIP12.61□□□□□ -0.396e-7■■□□□ 13.9
VCP-207ENST00000493886 PTP4A1Q93096 173 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 RNF32Q9H0A6 362 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 ENAMQ9NRM1 1142 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 SLC35A3Q9Y2D2 325 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 HEATR5AQ86XA9 2040 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 OR7A10O76100 309 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 PPP1R3DO95685 299 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 GIMD1P0DJR0 217 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 FOLR1P15328 257 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 PPP3R1P63098 170 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 FHL1Q13642 323 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 KLHL26Q53HC5 615 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 VASNQ6EMK4 673 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 MED25Q71SY5 747 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 NR2C2APQ86WQ0 139 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 OR8D2Q9GZM6 311 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 RPRD1BQ9NQG5 326 aaKnown RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 BAIAP2Q9UQB8 552 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 ALPK2Q86TB3 2170 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 CACNA1CQ13936 2221 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 IGKV3D-11A0A0A0MRZ8 115 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 RIIAD1A6NNX1 92 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 LYRM1O43325 122 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 AKAP8O43823 692 aaKnown RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 REM1O75628 298 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 YES1P07947 543 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 SLC6A6P31641 620 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 GPR143P51810 404 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 ACSM1Q08AH1 577 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 ZNF322Q6U7Q0 402 aaPredicted RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 GPR135Q8IZ08 494 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 ACBD7Q8N6N7 88 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 KISS1RQ969F8 398 aaPredicted RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 MOGAT1Q96PD6 335 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 TINAGL1Q9GZM7 467 aaPredicted RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 HDHD2Q9H0R4 259 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 GALNT9Q9HCQ5 603 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 MKKSQ9NPJ1 570 aaPredicted RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 MCUBQ9NWR8 336 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 SIRT4Q9Y6E7 314 aaPredicted RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 A0A0G2JMP0 313 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 A0A0X1KG70 313 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 ZNF98A6NK75 572 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 GLAP06280 429 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 PPICP45877 212 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 RPS7P62081 194 aaKnown RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 EFR3AQ14156 821 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 GATSQ8NAP1 163 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 OR4M2Q8NGB6 313 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 LHFPL5Q8TAF8 219 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 DNAJA4Q8WW22 397 aaPredicted RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 CDX2Q99626 313 aaPredicted RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 NDC1Q9BTX1 674 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 NXF5Q9H1B4 397 aaKnown RBP12.6□□□□□ -0.39
VCP-207ENST00000493886 OR51V1Q9H2C8 321 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 PPP1R3EQ9H7J1 279 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 SEMA5BQ9P283 1151 aa12.6□□□□□ -0.39
VCP-207ENST00000493886 A0A087WUJ7 227 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 TRDV1A0A1B0GX56 115 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 SLC22A31A6NKX4 558 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 AKR7A2O43488 359 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 HLA-DPB1P04440 258 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 SFTPCP11686 197 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 PEPDP12955 493 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 HK1P19367 917 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 NOS3P29474 1203 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 RORAP35398 523 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 CRMP1Q14194 572 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 CD200R1LQ6Q8B3 271 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 SLC43A2Q8N370 569 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 ARIH2OSQ8N7S6 290 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 TMEM99Q8N816 258 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 SGTBQ96EQ0 304 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 SLC41A2Q96JW4 573 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 UBQLN4Q9NRR5 601 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 EXTL2Q9UBQ6 330 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 LAMP5Q9UJQ1 280 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 ARID1BQ8NFD5 2236 aaPredicted RBP12.59□□□□□ -0.39
VCP-207ENST00000493886 IL33O95760 270 aa12.59□□□□□ -0.39
VCP-207ENST00000493886 HEXBP07686 556 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms