RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 RPL36A-HNRNPH2H7BZ11 118 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 WNT9BO14905 357 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 PIP5K1BO14986 540 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 AKR7A3O95154 331 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 HPXP02790 462 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 GSNP06396 782 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 NR4A1P22736 598 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 SOAT1P35610 550 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 SELENOPP49908 381 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 P2RY4P51582 365 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 KCNJ10P78508 379 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 PTGR1Q14914 329 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 ATP6AP1LQ52LC2 224 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 OLIG3Q7RTU3 272 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 C6orf120Q7Z4R8 191 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 GPAT4Q86UL3 456 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 CMIPQ8IY22 773 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 CCDC36Q8IYA8 594 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 RIBC1Q8N443 379 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 OR4M2Q8NGB6 313 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 NANPQ8TBE9 248 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 MZB1Q8WU39 189 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 ZMAT3Q9HA38 289 aaKnown RBP12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 DDX28Q9NUL7 540 aaKnown RBP12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 PRDM4Q9UKN5 801 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 ZNF281Q9Y2X9 895 aa12.24□□□□□ -0.45
PRPF40A-211ENST00000493468 CFLARO15519 480 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 UPK3AO75631 287 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 RP2O75695 350 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 FSHBP01225 129 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 ARAFP10398 606 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 COL8A2P25067 703 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 TACR3P29371 465 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 ECHS1P30084 290 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 CEACAM7Q14002 265 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 OR7A5Q15622 319 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 TUSC1Q2TAM9 212 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 CCDC153Q494R4 210 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 ATAD3BQ5T9A4 648 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 TMEM225Q6GV28 225 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 ACSM5Q6NUN0 579 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 FRRS1Q6ZNA5 592 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 CREB3L2Q70SY1 520 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 RIMKLAQ8IXN7 391 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 YIPF5Q969M3 257 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 PPP3R2Q96LZ3 170 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 DUSP26Q9BV47 211 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 MRPL37Q9BZE1 423 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 OR51I1Q9H343 314 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 ZNF385DQ9H6B1 395 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 ARMCX1Q9P291 453 aa12.23□□□□□ -0.45
PRPF40A-211ENST00000493468 RNF103-CHMP3A0A140T963 221 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 TMEM229AB2RXF0 380 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 AP3D1O14617 1153 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 PPIHO43447 177 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 PLIN3O60664 434 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 SKAP2O75563 359 aaPredicted RBP12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 PRPS1L1P21108 318 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 GATA3P23771 443 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 ROR2Q01974 943 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 FUT5Q11128 374 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 MSMPQ1L6U9 139 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 MMEL1Q495T6 779 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 XKR7Q5GH72 579 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 KRT80Q6KB66 452 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 NIPAL3Q6P499 406 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 TWIST2Q8WVJ9 160 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 CNOT9Q92600 299 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 ROPN1LQ96C74 230 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 ZNF665Q9H7R5 613 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 CRLF2Q9HC73 371 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 PSMC3IPQ9P2W1 217 aaPredicted RBP12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 RCE1Q9Y256 329 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 RASD1Q9Y272 281 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 FIS1Q9Y3D6 152 aa12.22□□□□□ -0.45
PRPF40A-211ENST00000493468 ZNF503-AS2A6NEH8 195 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 CLDN24A6NM45 220 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 POM121CA8CG34 1229 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 MPZL1O95297 269 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 FGF4P08620 206 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 UQCRBP14927 111 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 FPR2P25090 351 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 GLRXP35754 106 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 RPS23P62266 143 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 ARF1P84077 181 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 NPRL3Q12980 569 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 GSTA3Q16772 222 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 UGT3A2Q3SY77 523 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 ZNF311Q5JNZ3 666 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 MDP1Q86V88 176 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 EPHX4Q8IUS5 362 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 DDIASQ8IXT1 998 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 KRTCAP2Q8N6L1 136 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 ZG16BQ96DA0 208 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 RAB39BQ96DA2 213 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 TAPBPLQ9BX59 468 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 SLITRK2Q9H156 845 aa12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 UNKLQ9H9P5 680 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-211ENST00000493468 CORINQ9Y5Q5 1042 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms