RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 PDK3Q15120 406 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 ZNF239Q16600 458 aaKnown RBP6.02□□□□□ -1.45
VPS52-219ENST00000493379 NDUFAF6Q330K2 333 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 FBXL19-AS1Q494R0 122 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 C1orf185Q5T7R7 199 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 WBP2NLQ6ICG8 309 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 TMPPEQ6ZT21 453 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 FJX1Q86VR8 437 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 MICU2Q8IYU8 434 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 PGAM4Q8N0Y7 254 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 LILRA2Q8N149 483 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 ARHGAP24Q8N264 748 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 RPRMLQ8N4K4 120 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 OR2T12Q8NG77 320 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 OR6S1Q8NH40 331 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 SLC25A43Q8WUT9 341 aaPredicted RBP6.02□□□□□ -1.45
VPS52-219ENST00000493379 ASB5Q8WWX0 329 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 RND1Q92730 232 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 TAMM41Q96BW9 452 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 SH3YL1Q96HL8 342 aaPredicted RBP6.02□□□□□ -1.45
VPS52-219ENST00000493379 NSL1Q96IY1 281 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 RNF145Q96MT1 663 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 TUBA1CQ9BQE3 449 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 WFDC6Q9BQY6 131 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 GORASP2Q9H8Y8 452 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 RNF122Q9H9V4 155 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 C14orf119Q9NWQ9 140 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 NDE1Q9NXR1 346 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 OSGIN1Q9UJX0 560 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 VDAC3Q9Y277 283 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 HDGFL3Q9Y3E1 203 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 HEATR5AQ86XA9 2040 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 SONP18583 2426 aaKnown RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 MGAM2Q2M2H8 2515 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 CACNA1CQ13936 2221 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 A0A0G2JNJ9 132 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 GJE1A6NN92 205 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 HSPB2A8KAH6 182 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 AP3D1O14617 1153 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 LYPD3O95274 346 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 PMS2P2O95744 297 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 TGM6O95932 706 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 CGAP01215 116 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 IGF2P01344 180 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 IFNA14P01570 189 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 FESP07332 822 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 PRG2P13727 222 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 IGFBP2P18065 325 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 CALB2P22676 271 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 IDH2P48735 452 aaKnown RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 GSK3BP49841 420 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 POLR2HP52434 150 aaKnown RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 SLC7A2P52569 658 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 SMSP52788 366 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 NUP107P57740 925 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 SELENOWP63302 87 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 LIPEQ05469 1076 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 TFF3Q07654 80 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 PMPCAQ10713 525 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 TOMM20Q15388 145 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 HSPB2Q16082 182 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 CYP51A1Q16850 503 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 GLIPR1L2Q4G1C9 344 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 IQCCQ4KMZ1 466 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 RAET1LQ5VY80 246 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 STEAP3Q658P3 488 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 C3orf33Q6P1S2 294 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 ZNF585AQ6P3V2 769 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 CBLL1Q75N03 491 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 TRPM8Q7Z2W7 1104 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 MRGPRGQ86SM5 289 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 ATG4DQ86TL0 474 aaPredicted RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 ARMC8Q8IUR7 673 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 OR5M9Q8NGP3 310 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 DNAJA4Q8WW22 397 aaPredicted RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 OSTF1Q92882 214 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 SLC38A4Q969I6 547 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 C3orf49Q96BT1 292 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 KLHL15Q96M94 604 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 ZNF426Q9BUY5 554 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 POLR2J2Q9GZM3 115 aaKnown RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 POLR2J3Q9H1A7 115 aaKnown RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 CXXC4Q9H2H0 198 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 EXO5Q9H790 373 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 COQ10BQ9H8M1 238 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 SPAG4Q9NPE6 437 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 CTPS2Q9NRF8 586 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 SERINC1Q9NRX5 453 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 GLRX2Q9NS18 164 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 TAS2R1Q9NYW7 299 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 Q9UFV3 132 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 TESQ9UGI8 421 aaKnown RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 CHRNA9Q9UGM1 479 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 ING1Q9UK53 422 aaPredicted RBP6.01□□□□□ -1.45
VPS52-219ENST00000493379 USP22Q9UPT9 525 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 ATP23Q9Y6H3 246 aa6.01□□□□□ -1.45
VPS52-219ENST00000493379 PHF3Q92576 2039 aaKnown RBP6□□□□□ -1.45
VPS52-219ENST00000493379 IGKV3D-15A0A087WSY6 115 aa6□□□□□ -1.45
VPS52-219ENST00000493379 A0A087WUJ7 227 aa6□□□□□ -1.45
VPS52-219ENST00000493379 TMED7-TICAM2A0A0A6YYA0 188 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms