RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	ADRA2A	P08913	450 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	NPR2	P20594	1047 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	CXCR1	P25024	350 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	SERPINB5	P36952	375 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	ACAA2	P42765	397 aa	Known RBP	11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	ARF1	P84077	181 aa	Known RBP	11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	ROR2	Q01974	943 aa	Known RBP	11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	ADRM1	Q16186	407 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	MSMP	Q1L6U9	139 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	FAM174B	Q3ZCQ3	159 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	COX20	Q5RI15	118 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	CARM1	Q86X55	608 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	KDM8	Q8N371	416 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	SEMA6D	Q8NFY4	1073 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	WDR60	Q8WVS4	1066 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	NEU4	Q8WWR8	484 aa	Predicted RBP	11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	ZNF837	Q96EG3	531 aa	Predicted RBP	11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	TEX37	Q96LM6	180 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	TPK1	Q9H3S4	243 aa		11.84	□□□□□ -0.51
SAMM50-204	ENST00000493161	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	FRS3	O43559	492 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	RGS9	O75916	674 aa	Predicted RBP	11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	SNUPN	O95149	360 aa	Known RBP	11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	IGKV3-15	P01624	115 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	PRG2	P13727	222 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	IFNGR1	P15260	489 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	IL7R	P16871	459 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	CDKN2C	P42773	168 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	MAP2K6	P52564	334 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	NME5	P56597	212 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	SMU1	Q2TAY7	513 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	C3orf36	Q3SXR2	165 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	ANXA8L1	Q5VT79	327 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	LRRC74B	Q6ZQY2	392 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	VRK2	Q86Y07	508 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	CADM2	Q8N3J6	435 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF781	Q8N8C0	355 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	OR4F15	Q8NGB8	312 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	PNPT1	Q8TCS8	783 aa	Known RBP	11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	UBASH3B	Q8TF42	649 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	CKAP2	Q8WWK9	683 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	TESC	Q96BS2	214 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	C20orf27	Q9GZN8	174 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	PIF1	Q9H611	641 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	METTL17	Q9H7H0	456 aa	Predicted RBP	11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF442	Q9H7R0	627 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	SEC14L4	Q9UDX3	406 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	METRN	Q9UJH8	293 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	MEGF8	Q7Z7M0	2845 aa		11.83	□□□□□ -0.52
SAMM50-204	ENST00000493161	OR6C65	A6NJZ3	312 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	WNT9B	O14905	357 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	KCNAB3	O43448	404 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	SEC14L2	O76054	403 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	GSN	P06396	782 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	CBR1	P16152	277 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	EGR1	P18146	543 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	DVL1P1	P54792	670 aa	Predicted RBP	11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	IL1RL1	Q01638	556 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	NPRL3	Q12980	569 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	GSTA3	Q16772	222 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	C1orf140	Q5VVS0	124 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	PRAMEF8	Q5VWM4	474 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	PRAMEF7	Q5VXH5	474 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF836	Q6ZNA1	936 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	CLIP4	Q8N3C7	705 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	FAM169B	Q8N8A8	192 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	PKNOX2	Q96KN3	472 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	CCDC115	Q96NT0	180 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	TAPBPL	Q9BX59	468 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	LINC00470	Q9BZP3	86 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	NARFL	Q9H6Q4	476 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	LPAR2	Q9HBW0	351 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	DYNLRB1	Q9NP97	96 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	CHST2	Q9Y4C5	530 aa		11.82	□□□□□ -0.52
SAMM50-204	ENST00000493161	CDHR4	A6H8M9	788 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	CCDC154	A6NI56	674 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161		A8MVM7	634 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	FAM157A	C9JC47	383 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	NPIPB7	O75200	414 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF432	O94892	652 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	DBI	P07108	87 aa	Known RBP	11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	NUDT17	P0C025	328 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	NR2F1	P10589	423 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	COL8A2	P25067	703 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	IL12A	P29459	219 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	S100A3	P33764	101 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	ETV4	P43268	484 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	CLDN17	P56750	224 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	ELFN2	Q5R3F8	820 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	KRT80	Q6KB66	452 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	MDP1	Q86V88	176 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	VPS37A	Q8NEZ2	397 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	SLC25A36	Q96CQ1	311 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	PTDSS2	Q9BVG9	487 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	SLC6A13	Q9NSD5	602 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	BTNL2	Q9UIR0	455 aa		11.81	□□□□□ -0.52
SAMM50-204	ENST00000493161	DYSF	O75923	2080 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms