RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 BMP7P18075 431 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 NR4A1P22736 598 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 TCEA1P23193 301 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 RPS5P46782 204 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 SMSP52788 366 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 CSNK2BP67870 215 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 CDK5Q00535 292 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 GINS1Q14691 196 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF846Q147U1 533 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF74Q16587 644 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 DCDC5Q6ZRR9 648 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 PRSS48Q7RTY5 328 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 SLC46A3Q7Z3Q1 461 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 ZBTB46Q86UZ6 589 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF540Q8NDQ6 660 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 OR52L1Q8NGH7 329 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 OR8D4Q8NGM9 314 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 OR51A7Q8NH64 312 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 POC1BQ8TC44 478 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 CHPT1Q8WUD6 406 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 LIPHQ8WWY8 451 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 TAAR8Q969N4 342 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 TSSK6Q9BXA6 273 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 SLC25A19Q9HC21 320 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 ZFP64Q9NPA5 681 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 NANSQ9NR45 359 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 SERINC1Q9NRX5 453 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 AASSQ9UDR5 926 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 KLF13Q9Y2Y9 288 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 NCKAP5O14513 1909 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 LOC400499M0QZD8 3231 aa12.73□□□□□ -0.37
PDZRN3-210ENST00000492909 LRRC3CA6NJW4 275 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SHISA8B8ZZ34 492 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 PTP4A3O75365 173 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 CEACAM4O75871 244 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SULT1C4O75897 302 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 AHSA1O95433 338 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SP1P08047 785 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 CD46P15529 392 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 HK1P19367 917 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SRD5A2P31213 254 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 OPRL1P41146 370 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 FXYD6P3P58550 94 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 CLEC12AQ5QGZ9 265 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 C1orf140Q5VVS0 124 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 C12orf73Q69YU5 71 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SLC25A25Q6KCM7 469 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 C3orf33Q6P1S2 294 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 C19orf48Q6RUI8 117 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SMARCD3Q6STE5 483 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 CASP12Q6UXS9 341 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 ENTHD1Q8IYW4 607 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 GTPBP8Q8N3Z3 284 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 IQCF1Q8N6M8 205 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 LRRC17Q8N6Y2 441 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 OR2M7Q8NG81 312 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 DDIT4LQ96D03 193 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SAMD8Q96LT4 415 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 C5orf34Q96MH7 638 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 TNFRSF13CQ96RJ3 184 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 HES7Q9BYE0 225 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 OR11A1Q9GZK7 315 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 ACOT13Q9NPJ3 140 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 KLHL1Q9NR64 748 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 ERGIC3Q9Y282 383 aa12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 SPIN1Q9Y657 262 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 DSPP15924 2871 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-210ENST00000492909 CLDN25C9JDP6 229 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 OR2T1O43869 369 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 NME2P1O60361 137 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 MT-ATP6P00846 226 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 NME2P22392 152 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 FOXO1Q12778 655 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 TOMM20Q15388 145 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 SMN1Q16637 294 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 IGFN1Q86VF2 1251 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 SULF2Q8IWU5 870 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 CENPSQ8N2Z9 138 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 OR2T33Q8NG76 320 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 SNRNP27Q8WVK2 155 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 APH1BQ8WW43 257 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 UBE2FQ969M7 185 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 MOGAT1Q96PD6 335 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 SIGLEC11Q96RL6 698 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 PTDSS2Q9BVG9 487 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 PRRG3Q9BZD7 231 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 FKRPQ9H9S5 495 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 RASSF1Q9NS23 344 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 IL20RAQ9UHF4 553 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 RNF6Q9Y252 685 aa12.71□□□□□ -0.37
PDZRN3-210ENST00000492909 RPH3AQ9Y2J0 694 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms