RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GCN1Q92616 2671 aaKnown RBP12.41□□□□□ -0.42
CCM2-217ENST00000492883 TENM4Q6N022 2769 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 HIVEP3Q5T1R4 2406 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 KIAA1549Q9HCM3 1950 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 TUBAL3A6NHL2 446 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 LRRN3E7EW58 273 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 ATP5HO75947 161 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 CH25HO95992 272 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 MT-ATP6P00846 226 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 BGLAPP02818 100 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 UMPSP11172 480 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 IGFBP2P18065 325 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 RBM34P42696 430 aaKnown RBP12.4□□□□□ -0.42
CCM2-217ENST00000492883 OR3A2P47893 321 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 RASSF2P50749 326 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 LTBQ06643 244 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 C1DQ13901 141 aaKnown RBP12.4□□□□□ -0.42
CCM2-217ENST00000492883 TRIM25Q14258 630 aaKnown RBP12.4□□□□□ -0.42
CCM2-217ENST00000492883 TFAP2EQ6VUC0 442 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.4□□□□□ -0.42
CCM2-217ENST00000492883 UBE2J2Q8N2K1 259 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 FAM86B1Q8N7N1 296 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 OR9K2Q8NGE7 335 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 APH1AQ96BI3 265 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 CCDC124Q96CT7 223 aaKnown RBP12.4□□□□□ -0.42
CCM2-217ENST00000492883 SLC7A6OSQ96CW6 309 aaPredicted RBP12.4□□□□□ -0.42
CCM2-217ENST00000492883 MOGAT1Q96PD6 335 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 ZNF426Q9BUY5 554 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 PARPBPQ9NWS1 579 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 SEC14L4Q9UDX3 406 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 MED31Q9Y3C7 131 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 FLVCR1Q9Y5Y0 555 aa12.4□□□□□ -0.42
CCM2-217ENST00000492883 MYO18BQ8IUG5 2567 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 HEATR5AQ86XA9 2040 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 hCG_2039718K7EN88 272 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 FFAR1O14842 300 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 DNAJC8O75937 253 aaPredicted RBP12.39□□□□□ -0.43
CCM2-217ENST00000492883 OR6A2O95222 327 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 MT-ND1P03886 318 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 HIST1H2ABP04908 130 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 ZNF43P17038 809 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 ITGA2P17301 1181 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 RHCEP18577 417 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 AHCYP23526 432 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 P2RY4P51582 365 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 CBX1P83916 185 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 SORDQ00796 357 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 MS4A2Q01362 244 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 TRAM2Q15035 370 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 ZNF74Q16587 644 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 CASP12Q6UXS9 341 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 CREB3L2Q70SY1 520 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 HIST3H2AQ7L7L0 130 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 AAED1Q7RTV5 226 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 OFCC1Q8IZS5 231 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 SCAIQ8N9R8 606 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 ACBD4Q8NC06 268 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 OR5J2Q8NH18 312 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 PFN4Q8NHR9 129 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 HIST1H2ACQ93077 130 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 LRGUKQ96M69 825 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 OXGR1Q96P68 337 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 ZNF385AQ96PM9 386 aaKnown RBP12.39□□□□□ -0.43
CCM2-217ENST00000492883 MEPEQ9NQ76 525 aaPredicted RBP12.39□□□□□ -0.43
CCM2-217ENST00000492883 NANSQ9NR45 359 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 MRPL39Q9NYK5 338 aaKnown RBP12.39□□□□□ -0.43
CCM2-217ENST00000492883 NDUFAF4Q9P032 175 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 NDRG3Q9UGV2 375 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 PRSS50Q9UI38 385 aa12.39□□□□□ -0.43
CCM2-217ENST00000492883 NCOA6Q14686 2063 aaPredicted RBP12.39□□□□□ -0.43
CCM2-217ENST00000492883 PHF3Q92576 2039 aaKnown RBP12.38□□□□□ -0.43
CCM2-217ENST00000492883 FZD7O75084 574 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 ADAP00813 363 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 IGHV3-9P01782 118 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 ATP6V1B2P21281 511 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 NTF4P34130 210 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 UGT2B10P36537 528 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 PCYT1AP49585 367 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 UGT2B15P54855 530 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 MTX3Q5HYI7 312 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 RRM2BQ7LG56 351 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 TSEN54Q7Z6J9 526 aaKnown RBP12.38□□□□□ -0.43
CCM2-217ENST00000492883 LRRC17Q8N6Y2 441 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 ZIC4Q8N9L1 334 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 ASB9Q96DX5 294 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 SGTBQ96EQ0 304 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 C7orf34Q96L11 122 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 SEPHS2Q99611 448 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 FKRPQ9H9S5 495 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 NMNAT1Q9HAN9 279 aaPredicted RBP12.38□□□□□ -0.43
CCM2-217ENST00000492883 CRIM1Q9NZV1 1036 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 UPB1Q9UBR1 384 aa12.38□□□□□ -0.43
CCM2-217ENST00000492883 LOC102725191A0A1B0GVB3 256 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 ENO4A6NNW6 628 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 MS4A18H0YCH9 400 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms