RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CHN1	P15882	459 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ATP6V1C1	P21283	382 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	PAX7	P23759	505 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	LMO1	P25800	156 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	MPG	P29372	298 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	LCN1	P31025	176 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CD80	P33681	288 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CRYBB2	P43320	205 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	SERPINB4	P48594	390 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	RNF144A	P50876	292 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	NCBP2	P52298	156 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	PRKAA2	P54646	552 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CCL8	P80075	99 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	TEK	Q02763	1124 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	PAX8	Q06710	450 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	IFFO1	Q0D2I5	559 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	DCTN2	Q13561	401 aa	Known RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	LARS2	Q15031	903 aa	Known RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	MSMP	Q1L6U9	139 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	GRAMD1B	Q3KR37	738 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	LSM12	Q3MHD2	195 aa	Known RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	TBRG1	Q3YBR2	411 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	GLIPR1L2	Q4G1C9	344 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	TECRL	Q5HYJ1	363 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ZBTB37	Q5TC79	503 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	TSPO2	Q5TGU0	170 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	TIFAB	Q6ZNK6	161 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	GDPGP1	Q6ZNW5	385 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	MYPOP	Q86VE0	399 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	LRP11	Q86VZ4	500 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	C1orf52	Q8N6N3	182 aa	Known RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	OR7G2	Q8NG99	324 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	OR4F17	Q8NGA8	305 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	GATAD1	Q8WUU5	269 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	DCAKD	Q8WVC6	231 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CFHR4	Q92496	578 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	EXOSC8	Q96B26	276 aa	Known RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	TM4SF18	Q96CE8	201 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ZG16B	Q96DA0	208 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF837	Q96EG3	531 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CHMP6	Q96FZ7	201 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	C16orf58	Q96GQ5	468 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	OR5B2	Q96R09	309 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	OR4F4	Q96R69	305 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF382	Q96SR6	550 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CCT7	Q99832	543 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ASCL2	Q99929	193 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	HOXD1	Q9GZZ0	328 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF385D	Q9H6B1	395 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	NOX3	Q9HBY0	568 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	MID1IP1	Q9NPA3	183 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ATAD3A	Q9NVI7	634 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	NINJ2	Q9NZG7	142 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	MYEF2	Q9P2K5	600 aa	Known RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CRNN	Q9UBG3	495 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	DUSP13	Q9UII6	198 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CES1P1	Q9UKY3	287 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	PCDHGB4	Q9UN71	923 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	FOXJ3	Q9UPW0	622 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CACNG2	Q9Y698	323 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	DOCK11	Q5JSL3	2073 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	PLEC	Q15149	4684 aa	Known RBP	4.52	□□□□□ -1.69
SEC13-219	ENST00000492602		A0A087WV62	115 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	IGHV1-69-2	A0A0G2JMI3	117 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602		A0A1W2PPW3	197 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	ZNF716	A6NP11	495 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602		A8MT66	165 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	ALG1L2	C9J202	215 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	GTPBP1	O00178	669 aa	Known RBP	4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	SCD	O00767	359 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	COPE	O14579	308 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	GPR171	O14626	319 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	TPD52L2	O43399	206 aa	Known RBP	4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	MGRN1	O60291	552 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	GLRA3	O75311	464 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	TSPAN9	O75954	239 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	OR4F21	O95013	312 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	ZFPL1	O95159	310 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	NUDT14	O95848	222 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	IGLV1-44	P01699	117 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	IGHV4-59	P01825	116 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	KRT16	P08779	473 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	PPIAL4G	P0DN37	164 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	UROS	P10746	265 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	PRPS2	P11908	318 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	NEFH	P12036	1026 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	CPA3	P15088	417 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	DDC	P20711	480 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	HOXD3	P31249	432 aa	Predicted RBP	4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	RPL4	P36578	427 aa	Known RBP	4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	ASMT	P46597	345 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	PRIM2	P49643	509 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	HTR6	P50406	440 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	PRKAG1	P54619	331 aa		4.52	□□□□□ -1.69
SEC13-219	ENST00000492602	CDH13	P55290	713 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms